RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 RHOP08100 348 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 BRCC3P46736 316 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 RPS9P46781 194 aaKnown RBP12.5□□□□□ -0.41
LSG1-204ENST00000460584 FOSBP53539 338 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
LSG1-204ENST00000460584 PEX3P56589 373 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 ROR1Q01973 937 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
LSG1-204ENST00000460584 IL17AQ16552 155 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 GLRA4Q5JXX5 417 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 PRSS36Q5K4E3 855 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 VARS2Q5ST30 1063 aaKnown RBP12.5□□□□□ -0.41
LSG1-204ENST00000460584 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 POTEHQ6S545 545 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 ZPBP2Q6X784 338 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 SUSD3Q96L08 255 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 TRPV5Q9NQA5 729 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 KCND2Q9NZV8 630 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 GPR179Q6PRD1 2367 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 VPS13AQ96RL7 3174 aa12.5□□□□□ -0.41
LSG1-204ENST00000460584 WDR27A2RRH5 827 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 SHISA7A6NL88 538 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 E9PMD0 336 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 H7C4K7 107 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 STK25O00506 426 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 PODXLO00592 558 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 SLC26A4O43511 780 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 TOM1L1O75674 476 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 PTPN2P17706 415 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 SCP2P22307 547 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 EPHA5P54756 1037 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 SLC5A9Q2M3M2 681 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 SUMF1Q8NBK3 374 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 BEST2Q8NFU1 509 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 TSPAN18Q96SJ8 248 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 RUSC1Q9BVN2 902 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
LSG1-204ENST00000460584 OXCT2Q9BYC2 517 aaPredicted RBP12.49□□□□□ -0.41
LSG1-204ENST00000460584 FOXQ1Q9C009 403 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 PLEKHA5Q9HAU0 1116 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 GOLGA2P5Q9HBQ8 144 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 LTB4R2Q9NPC1 389 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 KMT5AQ9NQR1 393 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 HCFC1R1Q9NWW0 138 aa12.49□□□□□ -0.41
LSG1-204ENST00000460584 DCHS1Q96JQ0 3298 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 CCDC169A6NNP5 214 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 ADRB2P07550 413 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 MAPTP10636 758 aaKnown RBP12.48□□□□□ -0.41
LSG1-204ENST00000460584 PLS3P13797 630 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 LIG1P18858 919 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 CYP3A5P20815 502 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 RFX1P22670 979 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 FCARP24071 287 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 ID4P47928 161 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 AARSP49588 968 aaKnown RBP eCLIP12.48□□□□□ -0.41
LSG1-204ENST00000460584 MLLT6P55198 1093 aaPredicted RBP12.48□□□□□ -0.41
LSG1-204ENST00000460584 ATP2C1P98194 919 aaPredicted RBP12.48□□□□□ -0.41
LSG1-204ENST00000460584 MCL1Q07820 350 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 FZD5Q13467 585 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 SNW1Q13573 536 aaKnown RBP12.48□□□□□ -0.41
LSG1-204ENST00000460584 NBR1Q14596 966 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 SLC10A6Q3KNW5 377 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 DTHD1Q6ZMT9 781 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 KCNK18Q7Z418 384 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 SYT2Q8N9I0 419 aaPredicted RBP12.48□□□□□ -0.41
LSG1-204ENST00000460584 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 LEMD2Q8NC56 503 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 ZBTB44Q8NCP5 570 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 BCO2Q9BYV7 579 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 TRPV4Q9HBA0 871 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 POLD4Q9HCU8 107 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
LSG1-204ENST00000460584 FBXL5Q9UKA1 691 aa12.48□□□□□ -0.41
LSG1-204ENST00000460584 MRPS23Q9Y3D9 190 aaKnown RBP12.48□□□□□ -0.41
LSG1-204ENST00000460584 MYH15Q9Y2K3 1946 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 M0QZQ0 153 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 ZNF197O14709 1029 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 SPTLC1O15269 473 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 OAZ2O95190 189 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 LRPAP1P30533 357 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 SLC12A3P55017 1021 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 GNL2Q13823 731 aaKnown RBP12.47□□□□□ -0.41
LSG1-204ENST00000460584 RILPL1Q5EBL4 403 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 ARL6IP4Q66PJ3 421 aaKnown RBP12.47□□□□□ -0.41
LSG1-204ENST00000460584 APPL2Q8NEU8 664 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 RUBCNQ92622 972 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 PCDHB8Q9UN66 801 aa12.47□□□□□ -0.41
LSG1-204ENST00000460584 POLIQ9UNA4 740 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms