RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 LRRC52Q8N7C0 313 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 FBXL13Q8NEE6 735 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 SAMD11Q96NU1 681 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 CASD1Q96PB1 797 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 PPP1R10Q96QC0 940 aaKnown RBP13.32□□□□□ -0.28
HDAC4-206ENST00000460235 TBC1D13Q9NVG8 400 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 LTBP2Q14767 1821 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 MICAL3Q7RTP6 2002 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 NFICP08651 508 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 KRT19P08727 400 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 LRPAP1P30533 357 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 PIK3CAP42336 1068 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 GCLMP48507 274 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 COPB1P53618 953 aaKnown RBP13.31□□□□□ -0.28
HDAC4-206ENST00000460235 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-206ENST00000460235 FANCCQ00597 558 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 SHHQ15465 462 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 TCTN1Q2MV58 587 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 ZACNQ401N2 412 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 SV2CQ496J9 727 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 FAM117BQ6P1L5 589 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 SV2AQ7L0J3 742 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 FMNL3Q8IVF7 1028 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 ZNF689Q96CS4 500 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-206ENST00000460235 ZNF558Q96NG5 402 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-206ENST00000460235 FAN1Q9Y2M0 1017 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 PCDHA11Q9Y5I1 949 aa13.31□□□□□ -0.28
HDAC4-206ENST00000460235 LGALS16A8MUM7 142 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 PTGESO14684 152 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
HDAC4-206ENST00000460235 TRIM49P0CI25 452 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 TRIM49CP0CI26 452 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 RFX1P22670 979 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 YWHAEP62258 255 aaKnown RBP13.3□□□□□ -0.28
HDAC4-206ENST00000460235 UBXN1Q04323 297 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 KRT17Q04695 432 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 NCOA4Q13772 614 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 EXOC3L4Q17RC7 722 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 GLRA4Q5JXX5 417 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 ZSWIM2Q8NEG5 633 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 PCMTD1Q96MG8 357 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-206ENST00000460235 TRIM5Q9C035 493 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 MTMR12Q9C0I1 747 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 RBSNQ9H1K0 784 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 VPS16Q9H269 839 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 MMRN2Q9H8L6 949 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-206ENST00000460235 PUF60Q9UHX1 559 aaKnown RBP13.3□□□□□ -0.28
HDAC4-206ENST00000460235 COQ4Q9Y3A0 265 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 CITO14578 2027 aa13.3□□□□□ -0.28
HDAC4-206ENST00000460235 MEIS3P2A8K0S8 358 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 TMEM189-UBE2V1I3L0A0 370 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 TADA2AO75478 443 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 B3GAT3O94766 335 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 STAU1O95793 577 aaKnown RBP13.29□□□□□ -0.28
HDAC4-206ENST00000460235 ITGB3P05106 788 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 TPM1P09493 284 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 FAM163BP0C2L3 166 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 TBXAS1P24557 533 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-206ENST00000460235 OR1G1P47890 313 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 TAF6P49848 677 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 TNNC1P63316 161 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 DSC1Q08554 894 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 PAN2Q504Q3 1202 aaKnown RBP13.29□□□□□ -0.28
HDAC4-206ENST00000460235 ZNF667Q5HYK9 610 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 C9orf57Q5W0N0 161 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 PDXDC1Q6P996 788 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 ENOSF1Q7L5Y1 443 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 GSTCDQ8NEC7 633 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 SPATA18Q8TC71 538 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 HPDLQ96IR7 371 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 ZMAT2Q96NC0 199 aaKnown RBP13.29□□□□□ -0.28
HDAC4-206ENST00000460235 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
HDAC4-206ENST00000460235 NUP58Q9BVL2 599 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 RNF19AQ9NV58 838 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 DSEQ9UL01 958 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 AGAP1Q9UPQ3 857 aa13.29□□□□□ -0.28
HDAC4-206ENST00000460235 A0A1B0GTH6 734 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 A0A1W2PQC6 194 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 ANO9A1A5B4 782 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 PODXLO00592 558 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 HLA-DRAP01903 254 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 RB1P06400 928 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 ATP1A3P13637 1013 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 POLR2BP30876 1174 aaKnown RBP13.28□□□□□ -0.28
HDAC4-206ENST00000460235 MRE11P49959 708 aa13.28□□□□□ -0.28
HDAC4-206ENST00000460235 DLG4P78352 724 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms