RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PGRMC1O00264 195 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 ACKR2O00590 384 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 NFICP08651 508 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 H2AFXP16104 143 aaPredicted RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 PSMD6Q15008 389 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 FAM110CQ1W6H9 321 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 ZACNQ401N2 412 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 CYP4A22Q5TCH4 519 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 TWF2Q6IBS0 349 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 CHADLQ6NUI6 762 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 RGMBQ6NW40 437 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 TAPT1Q6NXT6 567 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 MAATS1Q7Z4T9 603 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 UBL4BQ8N7F7 174 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 RIN2Q8WYP3 895 aaPredicted RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 TMEM51Q9NW97 253 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 NOC2LQ9Y3T9 749 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 MCM3APO60318 1980 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 P4HA2O15460 535 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 PJA2O43164 708 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 MSCO60682 206 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 RTN2O75298 545 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 OAS2P29728 719 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 POLR2BP30876 1174 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 BRD3Q15059 726 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 TRADDQ15628 312 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 TRIP13Q15645 432 aaPredicted RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 ZNF792Q3KQV3 632 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 SEL1L2Q5TEA6 688 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 LIN9Q5TKA1 542 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 CXCL17Q6UXB2 119 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 PLPPR4Q7Z2D5 763 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 C12orf56Q8IXR9 622 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 KRT35Q92764 455 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 CDT1Q9H211 546 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 APOBEC3GQ9HC16 384 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 MYH9P35579 1960 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 GOLGA6L10A0A0M3HER8 536 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 LACTBL1A8MY62 500 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 ATF7P17544 494 aaPredicted RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 ARF4P18085 180 aaPredicted RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 PSMC4P43686 418 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 SNRPFP62306 86 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 CDR2Q01850 454 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 TARBP2Q15633 366 aaKnown RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 CRELD2Q6UXH1 353 aaPredicted RBP10□□□□□ -0.81
NUDCD3-203ENST00000460110 ANKRD23Q86SG2 305 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 CCDC105Q8IYK2 499 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 FAM71AQ8IYT1 594 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 SHC3Q92529 594 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 CCDC114Q96M63 670 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 ZFYVE28Q9HCC9 887 aa10□□□□□ -0.81
NUDCD3-203ENST00000460110 PI4K2BG5E9Z4 385 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 IQCF3P0C7M6 154 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 TMEM253P0C7T8 217 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 RTP1P59025 263 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 PTENP60484 403 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 FMO1Q01740 532 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 NFIL3Q16649 462 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 MEI1Q5TIA1 1274 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 C1orf131Q8NDD1 294 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 SHCBP1Q8NEM2 672 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 MAGOHBQ96A72 148 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 HAUS1Q96CS2 278 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 ACAP3Q96P50 834 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 CGRRF1Q99675 332 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 GPR88Q9GZN0 384 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 ACBD3Q9H3P7 528 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 PRMT7Q9NVM4 692 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 SNTG2Q9NY99 539 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 COG5Q9UP83 839 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 PCDHB2Q9Y5E7 798 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 SNX9Q9Y5X1 595 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 PHIPQ8WWQ0 1821 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 MAGEB2O15479 319 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 SASH3O75995 380 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 MYBL2P10244 700 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 KCNJ1P48048 391 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 BPIFB4P59827 614 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 CASP8Q14790 479 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 DUSP28Q4G0W2 176 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 ZNF484Q5JVG2 852 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 EXOC8Q8IYI6 725 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 UBA3Q8TBC4 463 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 RNF25Q96BH1 459 aaPredicted RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 CISHQ9NSE2 258 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 DIS3Q9Y2L1 958 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 GRAP2O75791 330 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 LCA5LO95447 670 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 CLTAP09496 248 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 PDGFRBP09619 1106 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 RARBP10826 455 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 CARSP49589 748 aaKnown RBP9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 CRHR2Q13324 411 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 OLFML2BQ68BL8 750 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 JADE1Q6IE81 842 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 BRSK2Q8IWQ3 736 aa9.99□□□□□ -0.81
NUDCD3-203ENST00000460110 GTF3C2Q8WUA4 911 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms