RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SEMA4DQ92854 862 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SAAL1Q96ER3 474 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SEC16BQ96JE7 1060 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 FAM167AQ96KS9 214 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CGRRF1Q99675 332 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 SELENOSQ9BQE4 189 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 JPH2Q9BR39 696 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 GLIS2Q9BZE0 524 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF518BQ9C0D4 1074 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 POLR3FQ9H1D9 316 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 GPRC5CQ9NQ84 441 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 HOMER2Q9NSB8 354 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 PARVAQ9NVD7 372 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 IP6K2Q9UHH9 426 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 DDX20Q9UHI6 824 aaKnown RBP9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ZNF112Q9UJU3 913 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 ADAMTS5Q9UNA0 930 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CNTN6Q9UQ52 1028 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CEP83Q9Y592 693 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 CAPN7Q9Y6W3 813 aa9.43□□□□□ -0.9
HDAC3-202ENST00000459727 DOCK1Q14185 1865 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 GOLGA8IPA6NC78 632 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 CFAP73A6NFT4 308 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 GOLGA8JA6NMD2 632 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 ANKRD63C9JTQ0 380 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 CAND2O75155 1236 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 DLATP10515 647 aaKnown RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 DSG3P32926 999 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 PTPN7P35236 360 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 SEC24CP53992 1094 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 ACTR2P61160 394 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 IFT88Q13099 833 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 CUL2Q13617 745 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 STAT4Q14765 748 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 EMC2Q15006 297 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 SIX1Q15475 284 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 STXBP2Q15833 593 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 FAM160B1Q5W0V3 765 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 SNRNP48Q6IEG0 339 aaKnown RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 TTC27Q6P3X3 843 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 DRICH1Q6PGQ1 229 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 ABHD15Q6UXT9 468 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 ARHGEF18Q6ZSZ5 1173 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 MON1BQ7L1V2 547 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 RPAINQ86UA6 219 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 DNAAF5Q86Y56 855 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 ABRAQ8N0Z2 381 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 KAT5Q92993 513 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 ZBTB9Q96C00 473 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 GRAMD1AQ96CP6 724 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 CCDC114Q96M63 670 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 TEPSINQ96N21 525 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 SCLT1Q96NL6 688 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 CAMKK2Q96RR4 588 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 FAM213AQ9BRX8 229 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 NIFKQ9BYG3 293 aaKnown RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 PORCNQ9H237 461 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 EPB41L4BQ9H329 900 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 UBN1Q9NPG3 1134 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 A1CFQ9NQ94 594 aaKnown RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 NRBP2Q9NSY0 501 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 DDX56Q9NY93 547 aaKnown RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 HOXC10Q9NYD6 342 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 SENP1Q9P0U3 644 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 AGO2Q9UKV8 859 aaKnown RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 STRIP2Q9ULQ0 834 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-202ENST00000459727 NR2E1Q9Y466 385 aa9.42□□□□□ -0.9
HDAC3-202ENST00000459727 A0A1B0GUA9 196 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 TISP43B9A030 160 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 K7ERI5 159 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 O00370 1275 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 ATP9AO75110 1047 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 CDH16O75309 829 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 DNAJC8O75937 253 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 TJP3O95049 919 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 STBD1O95210 358 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 ATG7O95352 703 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 TTC4O95801 387 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 HLA-DRAP01903 254 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 C4BPAP04003 597 aaKnown RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 OATP04181 439 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 CHN1P15882 459 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 TNNI1P19237 187 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 DRD4P21917 467 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 COPB2P35606 906 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 MARCKSL1P49006 195 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 RASA2Q15283 850 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 SWT1Q5T5J6 900 aaKnown RBP9.41□□□□□ -0.9
HDAC3-202ENST00000459727 PLEKHA7Q6IQ23 1121 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 SWSAP1Q6NVH7 229 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 SLC39A4Q6P5W5 647 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 RHBDF2Q6PJF5 856 aa9.41□□□□□ -0.9
HDAC3-202ENST00000459727 ADAT2Q7Z6V5 191 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms