RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 FAM160A2Q8N612 972 aaPredicted RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TCEAL4Q96EI5 215 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 DYDC2Q96IM9 177 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 RXFP3Q9NSD7 469 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ATRXP46100 2492 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 NCANO14594 1321 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 F5P12259 2224 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 K7ESF4 209 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 XBP1P17861 261 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 FGFR3P22607 806 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 GLRA2P23416 452 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CCNE1P24864 410 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 U2AF2P26368 475 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 GDI1P31150 447 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 POU5F1BQ06416 359 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ELAVL2Q12926 359 aaKnown RBP12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CCDC6Q16204 474 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 AASDHQ4L235 1098 aaPredicted RBP12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PRSS36Q5K4E3 855 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 NCAPH2Q6IBW4 605 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 VITQ6UXI7 678 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 OTUD6AQ7L8S5 288 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 MAP4K3Q8IVH8 894 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 BLIDQ8IZY5 108 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 IRF7Q92985 503 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TNFRSF25Q93038 417 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ASB16Q96NS5 453 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ZFP14Q9HCL3 533 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ZNF334Q9HCZ1 680 aaPredicted RBP12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 RBM12Q9NTZ6 932 aaKnown RBP12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 C2orf42Q9NWW7 574 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SMC3Q9UQE7 1217 aa12.44□□□□□ -0.42
PRAMEF35P-201ENST00000458709 FAM208BQ5VWN6 2430 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TICRRQ7Z2Z1 1910 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 WDR27A2RRH5 827 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TM4SF5O14894 197 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 RECQL4O94761 1208 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 THP07101 528 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PROS1P07225 676 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 GJB2P29033 226 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TKTP29401 623 aaKnown RBP12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ARL2P36404 184 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CCR2P41597 374 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 LIMK1P53667 647 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 EPHA7Q15375 998 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 WDR44Q5JSH3 913 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 Q6ZS52 159 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 LONP2Q86WA8 852 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 HAS1Q92839 578 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 FAM20AQ96MK3 541 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ZSWIM3Q96MP5 696 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CORO1BQ9BR76 489 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 NFKBIZQ9BYH8 718 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 FOXP1Q9H334 677 aaPredicted RBP12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ZSWIM4Q9H7M6 989 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SNTG2Q9NY99 539 aa12.43□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ARHGEF37A1IGU5 675 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 C1QTNF9BB2RNN3 333 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 I3L4J1 428 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 FOXD2O60548 495 aaPredicted RBP12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 LRG1P02750 347 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 C1QTNF9P0C862 333 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PTPN2P17706 415 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PSMC3P17980 439 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CNR2P34972 360 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 VIPR2P41587 438 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SPIRE1Q08AE8 756 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PTGDRQ13258 359 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CEP68Q76N32 757 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TPH2Q8IWU9 490 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SPEM1Q8N4L4 309 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 POLR3FQ9H1D9 316 aaPredicted RBP12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PDZD7Q9H5P4 517 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TRPV5Q9NQA5 729 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 BACE2Q9Y5Z0 518 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CNOT1A5YKK6 2376 aaKnown RBP12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SPEGQ15772 3267 aa12.42□□□□□ -0.42
PRAMEF35P-201ENST00000458709 LRRIQ4A6NIV6 560 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TMEM189-UBE2V1I3L0A0 370 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ARNTLO00327 626 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PRRG1O14668 218 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 TBX3O15119 743 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 DGAT1O75907 488 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 B3GAT3O94766 335 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PAPSS2O95340 614 aaPredicted RBP12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SYT1P21579 422 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SOX9P48436 509 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ROR1Q01973 937 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 GLRA4Q5JXX5 417 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CD300LGQ6UXG3 332 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 KRT25Q7Z3Z0 450 aa12.41□□□□□ -0.42
PRAMEF35P-201ENST00000458709 C12orf50Q8NA57 414 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms