RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ACO1P21399 889 aaKnown RBP9.44□□□□□ -0.9
RIF1-208ENST00000457745 EIF4A3P38919 411 aaKnown RBP9.44□□□□□ -0.9
RIF1-208ENST00000457745 GRM5P41594 1212 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 MYL6P60660 151 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 CYP27A1Q02318 531 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 ARID5AQ03989 594 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 PTK7Q13308 1070 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 TRIM14Q14142 442 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 DRAP1Q14919 205 aaPredicted RBP9.44□□□□□ -0.9
RIF1-208ENST00000457745 ARHGAP44Q17R89 818 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 FAM26DQ5JW98 314 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 KRT39Q6A163 491 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 ZNF571Q7Z3V5 609 aaPredicted RBP9.44□□□□□ -0.9
RIF1-208ENST00000457745 RPAINQ86UA6 219 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 RTN4RL1Q86UN2 441 aaPredicted RBP9.44□□□□□ -0.9
RIF1-208ENST00000457745 CNGA4Q8IV77 575 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 C1orf127Q8N9H9 656 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 RNF166Q96A37 237 aaPredicted RBP9.44□□□□□ -0.9
RIF1-208ENST00000457745 VTI1AQ96AJ9 217 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 PPP1R13BQ96KQ4 1090 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 SNX27Q96L92 541 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 XYLT2Q9H1B5 865 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 STARD7Q9NQZ5 370 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 MIOSQ9NXC5 875 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 APEX2Q9UBZ4 518 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 KCNG1Q9UIX4 513 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 NME7Q9Y5B8 376 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 MROH7Q68CQ1 1323 aa9.44□□□□□ -0.9
RIF1-208ENST00000457745 COL4A6Q14031 1691 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 DNM1LO00429 736 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 PTGESO14684 152 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 KIAA0391O15091 583 aaKnown RBP9.43□□□□□ -0.9
RIF1-208ENST00000457745 HCRTO43612 131 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 ZNF500O60304 480 aaPredicted RBP9.43□□□□□ -0.9
RIF1-208ENST00000457745 NBNO60934 754 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 CFHP08603 1231 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 GNAT1P11488 350 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 CKBP12277 381 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 CHRNB2P17787 502 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 TNNI1P19237 187 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 SCP2P22307 547 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 RAP1GAPP47736 663 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 TFAMQ00059 246 aaKnown RBP9.43□□□□□ -0.9
RIF1-208ENST00000457745 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
RIF1-208ENST00000457745 SLC27A1Q6PCB7 646 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 ALKAL1Q6UXT8 129 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 TRAPPC11Q7Z392 1133 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 WDR49Q8IV35 697 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 NME8Q8N427 588 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 GSTCDQ8NEC7 633 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 FBXL13Q8NEE6 735 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 U2AF1L4Q8WU68 220 aaKnown RBP9.43□□□□□ -0.9
RIF1-208ENST00000457745 ARMC5Q96C12 935 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 CCDC51Q96ER9 411 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 ZFP42Q96MM3 310 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 GLT1D1Q96MS3 346 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 ZSWIM1Q9BR11 485 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 NUP58Q9BVL2 599 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 PACSIN1Q9BY11 444 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
RIF1-208ENST00000457745 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 KIAA1586Q9HCI6 787 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 UBE2TQ9NPD8 197 aaPredicted RBP9.43□□□□□ -0.9
RIF1-208ENST00000457745 RAB20Q9NX57 234 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 AIPL1Q9NZN9 384 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 PADI3Q9ULW8 664 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 PPP2R2CQ9Y2T4 447 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 IPPQ9Y573 584 aa9.43□□□□□ -0.9
RIF1-208ENST00000457745 CEP350Q5VT06 3117 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 BRCA2P51587 3418 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 A0A087X0T9 212 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 KBTBD13C9JR72 458 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 DDX3XO00571 662 aaKnown RBP eCLIP9.42□□□□□ -0.9
RIF1-208ENST00000457745 P4HA2O15460 535 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 ARHGAP6O43182 974 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 EVI5O60447 810 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 STX10O60499 249 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 CABYRO75952 493 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 SGPL1O95470 568 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 LDHAP00338 332 aaKnown RBP9.42□□□□□ -0.9
RIF1-208ENST00000457745 ASS1P00966 412 aaKnown RBP9.42□□□□□ -0.9
RIF1-208ENST00000457745 CLTAP09496 248 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 FAM228BP0C875 321 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 COL6A1P12109 1028 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 SSTR3P32745 418 aaPredicted RBP9.42□□□□□ -0.9
RIF1-208ENST00000457745 GTF2H1P32780 548 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 ABCD1P33897 745 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 CLCN1P35523 988 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 SOX5P35711 763 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 PIK3CAP42336 1068 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 PTK2Q05397 1052 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 PTPN11Q06124 597 aaPredicted RBP9.42□□□□□ -0.9
RIF1-208ENST00000457745 GFPT1Q06210 699 aaPredicted RBP9.42□□□□□ -0.9
RIF1-208ENST00000457745 ENPEPQ07075 957 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 BIRC3Q13489 604 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 CAMK2BQ13554 666 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 NCOA4Q13772 614 aa9.42□□□□□ -0.9
RIF1-208ENST00000457745 ZBTB6Q15916 424 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms