RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SETMARQ53H47 684 aaPredicted RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 HHATQ5VTY9 493 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 HEATR6Q6AI08 1181 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 ITPRIPL1Q6GPH6 555 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 CNSTQ6PJW8 725 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 LDHAL6AQ6ZMR3 332 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 ADAT2Q7Z6V5 191 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 RALYLQ86SE5 291 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 TMEM110Q86TL2 294 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 SYNPOQ8N3V7 929 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 SPATA5Q8NB90 893 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 NETO2Q8NC67 525 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 PPP1R14CQ8TAE6 165 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 SMARCC2Q8TAQ2 1214 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 ACMSDQ8TDX5 336 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 HDAC2Q92769 488 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 DPF3Q92784 378 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 TNPO1Q92973 898 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 PEX11GQ96HA9 241 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 RBM14Q96PK6 669 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 KLHL25Q9H0H3 589 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 VCX3BQ9H321 246 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 ELAC1Q9H777 363 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 PHAXQ9H814 394 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 ABCF3Q9NUQ8 709 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 SEPT11Q9NVA2 429 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 FBLN5Q9UBX5 448 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 GIMAP2Q9UG22 337 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 CD2APQ9Y5K6 639 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 BACE2Q9Y5Z0 518 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 BRWD3Q6RI45 1802 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 ARPC4-TTLL3A0A0A6YYG9 625 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 ABHD14A-ACY1A0A1B0GW23 586 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 K7ESM1 405 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 KIF2AO00139 706 aaPredicted RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 NDC80O14777 642 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 ZBTB43O43298 467 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 KDM1AO60341 852 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 RFPL1O75677 317 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 PPM1BO75688 479 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 SNX4O95219 450 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 EPHX1P07099 455 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 PARP1P09874 1014 aaKnown RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 CA8P35219 290 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 EPS15P42566 896 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 CENPAP49450 140 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 RRP1P56182 461 aaKnown RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 GJA9P57773 515 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 SP140Q13342 867 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 COL9A2Q14055 689 aaPredicted RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 IMMTQ16891 758 aaKnown RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 C21orf62-AS1Q17RA5 79 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 KIAA0753Q2KHM9 967 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 CAVIN4Q5BKX8 364 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 SFMBT2Q5VUG0 894 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 CXorf57Q6NSI4 855 aaKnown RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 CEP68Q76N32 757 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 GALNT13Q8IUC8 556 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 TBC1D21Q8IYX1 336 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 CARFQ8N187 725 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 UBR7Q8N806 425 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 C7orf31Q8N865 590 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 CCDC148Q8NFR7 591 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 OR52K2Q8NGK3 314 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 RASGRP4Q8TDF6 673 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 POF1BQ8WVV4 589 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 MFSD3Q96ES6 412 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 FGD4Q96M96 766 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 COG8Q96MW5 612 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 PLEKHG4BQ96PX9 1271 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 BARD1Q99728 777 aaKnown RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 SH3GL3Q99963 347 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 C7orf25Q9BPX7 421 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 RHOBTB2Q9BYZ6 727 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 LMAN2LQ9H0V9 348 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 TNMDQ9H2S6 317 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 VPS37BQ9H9H4 285 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 RRAGDQ9NQL2 400 aaPredicted RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 HPF1Q9NWY4 346 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 IL20Q9NYY1 176 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 PDP2Q9P2J9 529 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 GULP1Q9UBP9 304 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 CGGBP1Q9UFW8 167 aaPredicted RBP5.94□□□□□ -1.46
VPS41-209ENST00000457055 SH3BGRL2Q9UJC5 107 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 ZNF112Q9UJU3 913 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 PHTF1Q9UMS5 762 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 PCDHB10Q9UN67 800 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 MAP3K1Q13233 1512 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 FAM135AQ9P2D6 1515 aa5.94□□□□□ -1.46
VPS41-209ENST00000457055 SAMD9LQ8IVG5 1584 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 A0A1B0GVC2 190 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 C2orf71A6NGG8 1288 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 SGSM2O43147 1006 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 NMT2O60551 498 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 TMEM127O75204 238 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 DDHD2O94830 711 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 YEATS4O95619 227 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 PAHP00439 452 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 CAPNS1P04632 268 aa5.93□□□□□ -1.46
VPS41-209ENST00000457055 CYP1A2P05177 515 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms