RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PNMA8AQ86V59 439 aaPredicted RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 CDCA5Q96FF9 252 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 STAMBPL1Q96FJ0 436 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 RAB17Q9H0T7 212 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 POLR3FQ9H1D9 316 aaPredicted RBP13.28□□□□□ -0.28
LINC00959-201ENST00000456581 CARD9Q9H257 536 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 MCM8Q9UJA3 840 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
LINC00959-201ENST00000456581 C5orf60A6NFR6 353 aa13.27□□□□□ -0.28
LINC00959-201ENST00000456581 SUPT20HL2P0C7V6 817 aa13.27□□□□□ -0.28
LINC00959-201ENST00000456581 UBA1P22314 1058 aaKnown RBP13.27□□□□□ -0.28
LINC00959-201ENST00000456581 SSTR3P32745 418 aaPredicted RBP13.27□□□□□ -0.28
LINC00959-201ENST00000456581 DRP2Q13474 957 aa13.27□□□□□ -0.28
LINC00959-201ENST00000456581 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.28
LINC00959-201ENST00000456581 TAX1BP1Q86VP1 789 aa13.27□□□□□ -0.28
LINC00959-201ENST00000456581 TRIM50Q86XT4 487 aa13.27□□□□□ -0.28
LINC00959-201ENST00000456581 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.27□□□□□ -0.28
LINC00959-201ENST00000456581 SENP7Q9BQF6 1050 aa13.27□□□□□ -0.28
LINC00959-201ENST00000456581 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.28
LINC00959-201ENST00000456581 GOLGA6L10A0A0M3HER8 536 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 MAFGO15525 162 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 CYP26A1O43174 497 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 GH1P01241 217 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 PAEPP09466 180 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 MAPTP10636 758 aaKnown RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 WNT7BP56706 349 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 ELF3P78545 371 aaPredicted RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 FAM182AQ5T1J6 154 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 INTS8Q75QN2 995 aaKnown RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 NOP9Q86U38 636 aaKnown RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 CCDC105Q8IYK2 499 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 EIF1ADQ8N9N8 165 aaKnown RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 POMGNT1Q8WZA1 660 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 DHX38Q92620 1227 aaKnown RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 ZBTB10Q96DT7 871 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 ZNF668Q96K58 619 aaPredicted RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 ZBTB45Q96K62 511 aaPredicted RBP13.27□□□□□ -0.29
LINC00959-201ENST00000456581 PCYT2Q99447 389 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 PDLIM7Q9NR12 457 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 PNMA3Q9UL41 463 aa13.27□□□□□ -0.29
LINC00959-201ENST00000456581 CNMDO75829 334 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 ARIH2O95376 493 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 MARK3P27448 753 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 PREPLQ4J6C6 727 aaPredicted RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 MAP4K3Q8IVH8 894 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 SGSM3Q96HU1 749 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 ZSWIM1Q9BR11 485 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 HERPUD2Q9BSE4 406 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 PI4K2AQ9BTU6 479 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 SUFUQ9UMX1 484 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 CLDN3O15551 220 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 EDN1P05305 212 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 RARAP10276 462 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 CHRNB2P17787 502 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 CHKAP35790 457 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 SNCBQ16143 134 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 SEZ6Q53EL9 994 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 SCARA3Q6AZY7 606 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 ANKRD42Q8N9B4 389 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 CHST13Q8NET6 341 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 GDAP1Q8TB36 358 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 ASAP3Q8TDY4 903 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 BICD1Q96G01 975 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 ZNF302Q9NR11 478 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 INTS9Q9NV88 658 aaKnown RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 PCDHA3Q9Y5H8 950 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 A0A0G2JLL6 359 aaPredicted RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 GSTTP1A0A1W2PQM5 241 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 PHF2O75151 1096 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 CLSTN1O94985 981 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 CCDC172P0C7W6 258 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 PAX7P23759 505 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 MMP13P45452 471 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 IREB2P48200 963 aaKnown RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 MXI1P50539 228 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 POLGP54098 1239 aaPredicted RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 MPP2Q14168 576 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 EMC2Q15006 297 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 ZKSCAN8Q15776 578 aaPredicted RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 MIS18BP1Q6P0N0 1132 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 PRRT2Q7Z6L0 340 aaPredicted RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 RIOX2Q8IUF8 465 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 PPM1KQ8N3J5 372 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 RDM1Q8NG50 284 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 FAM213AQ9BRX8 229 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 ST6GALNAC4Q9H4F1 302 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 TBK1Q9UHD2 729 aa13.26□□□□□ -0.29
LINC00959-201ENST00000456581 TTC7AQ9ULT0 858 aaPredicted RBP13.26□□□□□ -0.29
LINC00959-201ENST00000456581 NFASCO94856 1347 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 O00370 1275 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 DGAT1O75907 488 aa13.25□□□□□ -0.29
LINC00959-201ENST00000456581 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms