RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 MFAP3P55082 362 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 SESN3P58005 492 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 FMO1Q01740 532 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 PDCD2Q16342 344 aaPredicted RBP14.57□□□□□ -0.08
PTPRE-204ENST00000455661 SLC47A2Q86VL8 602 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 DCAF4Q8WV16 495 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 RBM15Q96T37 977 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPRE-204ENST00000455661 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
PTPRE-204ENST00000455661 TRIM4Q9C037 500 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 KCND2Q9NZV8 630 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 CCDC22O60826 627 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 UFL1O94874 794 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 ZWINTO95229 277 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 CA4P22748 312 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 PPP3CAQ08209 521 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 MTHFD1LQ6UB35 978 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 C4orf50Q6ZRC1 276 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 NLRP9Q7RTR0 991 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 TDRPQ86YL5 185 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 MARCH10Q8NA82 808 aaPredicted RBP14.57□□□□□ -0.08
PTPRE-204ENST00000455661 FAM136AQ96C01 138 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 TTC25Q96NG3 672 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 TRAPPC9Q96Q05 1148 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 NACC1Q96RE7 527 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 SRP68Q9UHB9 627 aaKnown RBP14.57□□□□□ -0.08
PTPRE-204ENST00000455661 ANAPC7Q9UJX3 599 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 DAGLAQ9Y4D2 1042 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 POC1B-GALNT4F8VUJ3 575 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 C2CD2LO14523 706 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 TROVE2P10155 538 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPRE-204ENST00000455661 SHMT1P34896 483 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 RCN2Q14257 317 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 KHDC1Q4VXA5 237 aaKnown RBP14.56□□□□□ -0.08
PTPRE-204ENST00000455661 SYDE2Q5VT97 1194 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 SNX30Q5VWJ9 437 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 ACAD10Q6JQN1 1059 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 FBXO11Q86XK2 927 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 PPM1KQ8N3J5 372 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 PPFIBP2Q8ND30 876 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 ZNF398Q8TD17 642 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 KIFAP3Q92845 792 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 KAT5Q92993 513 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 PCIF1Q9H4Z3 704 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 KIAA1586Q9HCI6 787 aa14.56□□□□□ -0.08
PTPRE-204ENST00000455661 COL5A3P25940 1745 aaPredicted RBP14.56□□□□□ -0.08
PTPRE-204ENST00000455661 CHMP2AO43633 222 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 HLA-DOAP06340 250 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 ATP2B4P23634 1241 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 RPA3P35244 121 aaPredicted RBP14.55□□□□□ -0.08
PTPRE-204ENST00000455661 SLC1A1P43005 524 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 CCNG2Q16589 344 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 USH1GQ495M9 461 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 SLFN13Q68D06 897 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 GSTA5Q7RTV2 222 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 PRUNE1Q86TP1 453 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 MTDHQ86UE4 582 aaKnown RBP14.55□□□□□ -0.08
PTPRE-204ENST00000455661 SLC51AQ86UW1 340 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 ZCCHC9Q8N567 271 aaKnown RBP14.55□□□□□ -0.08
PTPRE-204ENST00000455661 CYP2W1Q8TAV3 490 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 SLC5A5Q92911 643 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 TMEM206Q9H813 350 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 SAYSD1Q9NPB0 183 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 ZBTB39O15060 712 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 CYP11B1P15538 503 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 MXI1P50539 228 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 GPSM2P81274 684 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 OCRLQ01968 901 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 RCN1Q15293 331 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 PPP1R15BQ5SWA1 713 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 RNF220Q5VTB9 566 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTPRE-204ENST00000455661 OTOP1Q7RTM1 612 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 OTOAQ7RTW8 1153 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 C4orf33Q8N1A6 199 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 SCG3Q8WXD2 468 aaKnown RBP14.55□□□□□ -0.08
PTPRE-204ENST00000455661 CCDC17Q96LX7 622 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 BTBD10Q9BSF8 475 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 PIDD1Q9HB75 910 aa14.55□□□□□ -0.08
PTPRE-204ENST00000455661 K7ENM7 598 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 ATP9AO75110 1047 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 CYP3A4P08684 503 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 MYBL1P10243 752 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 POLE2P56282 527 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 SLC34A1Q06495 639 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 SEPT7Q16181 437 aaKnown RBP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 PKN2Q16513 984 aaKnown RBP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 OR52E8Q6IFG1 317 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 CLNKQ7Z7G1 428 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 LARGE2Q8N3Y3 721 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 ZNF75CPQ92670 426 aaPredicted RBP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 STMN2Q93045 179 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 FAM81BQ96LP2 452 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 FGD4Q96M96 766 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 WNK3Q9BYP7 1800 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 PPP1R12CQ9BZL4 782 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 CNTNAP4Q9C0A0 1308 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 NPHS2Q9NP85 383 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 ACP6Q9NPH0 428 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 CYLDQ9NQC7 956 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms