RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SUSD6Q92537 303 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 EDAQ92838 391 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 DYDC2Q96IM9 177 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CEP170P1Q96L14 293 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 PHF7Q9BWX1 381 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 C22orf23Q9BZE7 217 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 TM6SF1Q9BZW5 370 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 DNAJC25Q9H1X3 360 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 SMOC2Q9H3U7 446 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 MINDY3Q9H8M7 445 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 KCNMB3Q9NPA1 279 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CYP26B1Q9NR63 512 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CHST12Q9NRB3 414 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 FAM105AQ9NUU6 356 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 TBC1D13Q9NVG8 400 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 DACT1Q9NYF0 836 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ORC3Q9UBD5 711 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 DNAJB4Q9UDY4 337 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 VAV3Q9UKW4 847 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 PIN4Q9Y237 131 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 PCDHB2Q9Y5E7 798 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ZDBF2Q9HCK1 2354 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ARID2Q68CP9 1835 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 TMEM221A6NGB7 291 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 BTBD18B2RXH4 712 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 M0R296 226 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 SLITRK3O94933 977 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 PDGFBP01127 241 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 POMCP01189 267 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 GALTP07902 379 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 EPCAMP16422 314 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 ATP2B1P20020 1258 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 MX2P20592 715 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 SFPQP23246 707 aaKnown RBP eCLIP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 GNA15P30679 374 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 YWHABP31946 246 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 SLC11A1P49279 550 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 POLGP54098 1239 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 PCBP4P57723 403 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 CDC42EP1Q00587 391 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 RNASELQ05823 741 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 LAMTOR4Q0VGL1 99 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 PPP2R5CQ13362 524 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 MRPL58Q14197 206 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 GAS6Q14393 721 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 SMC1AQ14683 1233 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 CBX2Q14781 532 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 EPHA7Q15375 998 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 NOMO2Q5JPE7 1267 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 UBXN11Q5T124 520 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 RARS2Q5T160 578 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 NCAPH2Q6IBW4 605 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 PPP4R3AQ6IN85 833 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 GALNT17Q6IS24 598 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 MOXD1Q6UVY6 613 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 AGMOQ6ZNB7 445 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 MAEAQ7L5Y9 396 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 TAS1R1Q7RTX1 841 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 SYT9Q86SS6 491 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 ZNF410Q86VK4 478 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 CDR2LQ86X02 465 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 GALNT12Q8IXK2 581 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 RNF149Q8NC42 400 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 FBF1Q8TES7 1133 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 RABGGTAQ92696 567 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 TMEM169Q96HH4 297 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 IGSF21Q96ID5 467 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 CPB2Q96IY4 423 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 FAM20AQ96MK3 541 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 POP1Q99575 1024 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 CDCA3Q99618 268 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 LXNQ9BS40 222 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 VN1R3Q9BXE9 311 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 INO80BQ9C086 356 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 POMKQ9H5K3 350 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 POLD4Q9HCU8 107 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 NGRNQ9NPE2 291 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 MIOSQ9NXC5 875 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 NXF1Q9UBU9 619 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 LZTS1Q9Y250 596 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 HES2Q9Y543 173 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 COL4A3BPQ9Y5P4 624 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 HCFC2Q9Y5Z7 792 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 PLXNA3P51805 1871 aa5.23□□□□□ -1.57
GTF3C3-208ENST00000455546 DOCK8Q8NF50 2099 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 PTPRZ1P23471 2315 aaPredicted RBP5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 C2CD4DB7Z1M9 353 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 F8W810 466 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 J3QW42 95 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 EPB41L2O43491 1005 aaKnown RBP5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 JAK2O60674 1132 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 ZNF623O75123 536 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 CDKL5O76039 1030 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 BAG4O95429 457 aaKnown RBP5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 ALDH2P05091 517 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 ASGR2P07307 311 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 SPATA31D3P0C874 917 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 XBP1P17861 261 aa5.22□□□□□ -1.57
GTF3C3-208ENST00000455546 PPM1AP35813 382 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms