RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 DNAJC25Q9H1X3 360 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 ZNF576Q9H609 170 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 DPP3Q9NY33 737 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 DNAJB4Q9UDY4 337 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 NRP1O14786 923 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 B4GALT3O60512 393 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 TMEM191BP0C7N4 346 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 PNPLA4P41247 253 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 OR1G1P47890 313 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 SOX4Q06945 474 aaPredicted RBP15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 ELAVL2Q12926 359 aaKnown RBP15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 CCDC40Q4G0X9 1142 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 ANO6Q4KMQ2 910 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 C11orf57Q6ZUT1 292 aaPredicted RBP15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 FBXO22Q8NEZ5 403 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 IGSF21Q96ID5 467 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 C17orf80Q9BSJ5 609 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 GZF1Q9H116 711 aaPredicted RBP15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 TUBGCP4Q9UGJ1 667 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 PUF60Q9UHX1 559 aaKnown RBP15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 R3HCC1Q9Y3T6 440 aaKnown RBP15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 NFE2L3Q9Y4A8 694 aa15.46■□□□□ 0.07
HMGXB4-204ENST00000455359 ANO9A1A5B4 782 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 CASTOR2A6NHX0 329 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 LRRIQ3A6PVS8 624 aaPredicted RBP15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 H3BNC9 293 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 PODXLO00592 558 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 PIRO00625 290 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 PMM2O15305 246 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 TRAPPC3O43617 180 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 B3GAT3O94766 335 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 ARHGEF15O94989 841 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 ZNF165P49910 485 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 WNT7BP56706 349 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 RBP5P82980 135 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 SPAG1Q07617 926 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 ZNF697Q5TEC3 545 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 LRRC52Q8N7C0 313 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 EEF2KMTQ96G04 330 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 TMEM169Q96HH4 297 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 LMAN2LQ9H0V9 348 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 MAGEC2Q9UBF1 373 aaPredicted RBP15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 HCSTQ9UBK5 93 aa15.45■□□□□ 0.06
HMGXB4-204ENST00000455359 ARHGEF37A1IGU5 675 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 SOX1O00570 391 aaPredicted RBP15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 TADA2AO75478 443 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 FGF18O76093 207 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 EEF1GP26641 437 aaKnown RBP15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 CLCNKBP51801 687 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 ZACNQ401N2 412 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 C9orf57Q5W0N0 161 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 TRAPPC11Q7Z392 1133 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 DDX53Q86TM3 631 aaKnown RBP15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 TRIM59Q8IWR1 403 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 GPR65Q8IYL9 337 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 C1orf127Q8N9H9 656 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 KLHL23Q8NBE8 558 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 OR5B17Q8NGF7 314 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 PLEKHO2Q8TD55 490 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 ARNTL2Q8WYA1 636 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 ZNF560Q96MR9 790 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 MTMR12Q9C0I1 747 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 TMEM8AQ9HCN3 771 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 MARCH5Q9NX47 278 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 ADAM28Q9UKQ2 775 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 PRG3Q9Y2Y8 225 aaPredicted RBP15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 SF3B1O75533 1304 aaKnown RBP eCLIP15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 PTPRJQ12913 1337 aa15.44■□□□□ 0.06
HMGXB4-204ENST00000455359 P4HA2O15460 535 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 N4BP1O75113 896 aaKnown RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 STAU1O95793 577 aaKnown RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 EFEMP2O95967 443 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 C4BPAP04003 597 aaKnown RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 ATICP31939 592 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 ZNF445P59923 1031 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 BMS1Q14692 1282 aaKnown RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 C1orf220Q5T0J3 134 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 KRT39Q6A163 491 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 PDE12Q6L8Q7 609 aaKnown RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 LRSAM1Q6UWE0 723 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 C15orf39Q6ZRI6 1047 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 IRF2BP1Q8IU81 584 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 CXorf38Q8TB03 319 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 SPPL3Q8TCT6 385 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 SLC35C1Q96A29 364 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 POP1Q99575 1024 aaKnown RBP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 GOLGA2P5Q9HBQ8 144 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 LMCD1Q9NZU5 365 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 NUB1Q9Y5A7 615 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 KIF4AO95239 1232 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 ITGB3P05106 788 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 ITGB1P05556 798 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 AARSP49588 968 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 TAF6P49848 677 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 DLG4P78352 724 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 CETN1Q12798 172 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 MYO1EQ12965 1108 aa15.43■□□□□ 0.06
HMGXB4-204ENST00000455359 GPM6BQ13491 265 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms