RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TULP1O00294 542 aaPredicted RBP17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 MAGEA10P43363 369 aaPredicted RBP17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 KCNJ6P48051 423 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 NOMO2Q5JPE7 1267 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 RASIP1Q5U651 963 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 BEST2Q8NFU1 509 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 TAS1R2Q8TE23 839 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 C18orf25Q96B23 403 aaPredicted RBP17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 CASD1Q96PB1 797 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 RC3H2Q9HBD1 1191 aaKnown RBP17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 KANSL3Q9P2N6 904 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 TUBGCP4Q9UGJ1 667 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 SIX4Q9UIU6 781 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 ITGA11Q9UKX5 1188 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 DGKIO75912 1065 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 VNN1O95497 513 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 LRPAP1P30533 357 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 SOX4Q06945 474 aaPredicted RBP17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 KCNMA1Q12791 1236 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 CETN1Q12798 172 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 BIRC3Q13489 604 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 GBP6Q6ZN66 633 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 ABI1Q8IZP0 508 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 FBXL13Q8NEE6 735 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 LMO3Q8TAP4 145 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 URGCPQ8TCY9 931 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 DPP3Q9NY33 737 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 CXXC1Q9P0U4 656 aaPredicted RBP17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 INPP5FQ9Y2H2 1132 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 SIK3Q9Y2K2 1263 aa17.91■□□□□ 0.46
CCDC90B-202ENST00000455220 ZBBXA8MT70 800 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 POMCP01189 267 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 GUCY2FP51841 1108 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 SEMA4DQ92854 862 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 ZNF689Q96CS4 500 aaPredicted RBP17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 MTIF3Q9H2K0 278 aaKnown RBP17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 TBC1D13Q9NVG8 400 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 RAB20Q9NX57 234 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 GCNT4Q9P109 453 aa17.9■□□□□ 0.46
CCDC90B-202ENST00000455220 ANO9A1A5B4 782 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 UPP2O95045 317 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 ADCY5O95622 1261 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 CST3P01034 146 aaPredicted RBP17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 HLA-DRAP01903 254 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 ITGB3P05106 788 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 GATMP50440 423 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 DSC1Q08554 894 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 NCOA4Q13772 614 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 SYCP1Q15431 976 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 SCARA3Q6AZY7 606 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 DPY19L2P1Q6NXN4 242 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 TMEM130Q8N3G9 435 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 EHBP1Q8NDI1 1231 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 CRACR2AQ9BSW2 395 aa17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 MRPL9Q9BYD2 267 aaKnown RBP17.89■□□□□ 0.45
CCDC90B-202ENST00000455220 PHACTR2O75167 634 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 PON1P27169 355 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 PIK3CAP42336 1068 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 TUSC3Q13454 348 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 C9orf57Q5W0N0 161 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 VSTM4Q8IW00 320 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 PHOSPHO2Q8TCD6 241 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 SLC9A7Q96T83 725 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 INTS2Q9H0H0 1204 aaKnown RBP17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 GOLGA2P5Q9HBQ8 144 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 ITIH6Q6UXX5 1313 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 SCN1AP35498 2009 aa17.88■□□□□ 0.45
CCDC90B-202ENST00000455220 TBKBP1A7MCY6 615 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 PIRO00625 290 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 ZC3H11AO75152 810 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 LRRN2O75325 713 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 GJB5O95377 273 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 STAU1O95793 577 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 SLC9A1P19634 815 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 CDC25BP30305 580 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 POLR2BP30876 1174 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 RBP5P82980 135 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 PTPN21Q16825 1174 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 TRIM65Q6PJ69 517 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 TMCO2Q7Z6W1 182 aaPredicted RBP17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 LRRC43Q8N309 656 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 LRRC52Q8N7C0 313 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 GDF15Q99988 308 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 XYLT2Q9H1B5 865 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 VRTNQ9H8Y1 702 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 PLCB1Q9NQ66 1216 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 SLC4A7Q9Y6M7 1214 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 PDE4DIPQ5VU43 2346 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 B4GALT3O60512 393 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 DDHD2O94830 711 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 ASS1P00966 412 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 ATICP31939 592 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 RPL9P32969 192 aaKnown RBP17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 KLK7P49862 253 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 MYL6P60660 151 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 HTRA4P83105 476 aaPredicted RBP17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 TRPC3Q13507 836 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 ZNF280BQ86YH2 543 aa17.87■□□□□ 0.45
CCDC90B-202ENST00000455220 COLGALT2Q8IYK4 626 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms