RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 CYFIP2Q96F07 1278 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 CEP89Q96ST8 783 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 GDF15Q99988 308 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 NTPCRQ9BSD7 190 aaKnown RBP11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 NSRP1Q9H0G5 558 aaKnown RBP11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 LRRC19Q9H756 370 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 WHRNQ9P202 907 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 COG5Q9UP83 839 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
GTF3C2-206ENST00000454704 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 STAM2O75886 525 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 MAGEA10P43363 369 aaPredicted RBP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 CALCOCO2Q13137 446 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 DMP1Q13316 513 aaPredicted RBP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 TRADDQ15628 312 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 C1orf220Q5T0J3 134 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 MAP3K21Q5TCX8 1036 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 GKAP1Q5VSY0 366 aaPredicted RBP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 ICE2Q659A1 982 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 MFSD5Q6N075 450 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 CCDC121Q6ZUS5 278 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 NLRX1Q86UT6 975 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 DDX42Q86XP3 938 aaKnown RBP eCLIP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 SLC13A5Q86YT5 568 aaPredicted RBP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 CCDC50Q8IVM0 306 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 ARHGEF19Q8IW93 802 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 CACNA2D3Q8IZS8 1091 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 FBXL13Q8NEE6 735 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 ZNF564Q8TBZ8 553 aaPredicted RBP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 CLEC4DQ8WXI8 215 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 TATDN2Q93075 761 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 MAGOHBQ96A72 148 aaKnown RBP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 CDHR1Q96JP9 859 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 MFSD14AQ96MC6 490 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 FOXP3Q9BZS1 431 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 DPH5Q9H2P9 285 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 PLEKHA4Q9H4M7 779 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.31□□□□□ -0.6
GTF3C2-206ENST00000454704 MYH9P35579 1960 aaKnown RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 FSCN2O14926 492 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ASAP2O43150 1006 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 LRRN2O75325 713 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 COMTP21964 271 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 MAPK4P31152 587 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 HPDP32754 393 aaPredicted RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 BMP8BP34820 402 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 COILP38432 576 aaPredicted RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 MMP13P45452 471 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 OAZ1P54368 228 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ACTN3Q08043 901 aaPredicted RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 SNRNP35Q16560 246 aaKnown RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ERMARDQ5T6L9 678 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ACAD10Q6JQN1 1059 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ZDHHC24Q6UX98 284 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 PRELID2Q8N945 189 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ALG3Q92685 438 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ATP6V0A1Q93050 837 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ART4Q93070 314 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 TACO1Q9BSH4 297 aaKnown RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 TRIM51Q9BSJ1 452 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 CELF4Q9BZC1 486 aaKnown RBP11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 PORCNQ9H237 461 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 CENPHQ9H3R5 247 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 GRHL1Q9NZI5 618 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 RBPJLQ9UBG7 517 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 TBX20Q9UMR3 447 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 ATP8A1Q9Y2Q0 1164 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 SAMM50Q9Y512 469 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 NFASCO94856 1347 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
GTF3C2-206ENST00000454704 H0YHG0 523 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 DLL1O00548 723 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 ZBTB39O15060 712 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 RGS16O15492 202 aaPredicted RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 SPOPO43791 374 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 ZBED4O75132 1171 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 ECEL1O95672 775 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 GSTA1P08263 222 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CYP11B1P15538 503 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CHRNB2P17787 502 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 ITIH2P19823 946 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 GCLMP48507 274 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms