RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CETN1Q12798 172 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 FIGNQ5HY92 759 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 EEF1DP3Q658K8 133 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 PACS2Q86VP3 889 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 WNT8BQ93098 351 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 FNBP1Q96RU3 617 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 AGPAT5Q9NUQ2 364 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 PIN4Q9Y237 131 aaKnown RBP17.07■□□□□ 0.32
SNX17-204ENST00000453453 CEP350Q5VT06 3117 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 ABLIM1O14639 778 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
SNX17-204ENST00000453453 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 GJA8P48165 433 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 CDK7P50613 346 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 MGAT3Q09327 533 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 PSMD6Q15008 389 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 SURF1Q15526 300 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 FOXR1Q6PIV2 292 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 THNSL1Q8IYQ7 743 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 AENQ8WTP8 325 aaKnown RBP17.06■□□□□ 0.32
SNX17-204ENST00000453453 TMEM40Q8WWA1 233 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 JAKMIP2Q96AA8 810 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 CCDC127Q96BQ5 260 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 DEF6Q9H4E7 631 aa17.06■□□□□ 0.32
SNX17-204ENST00000453453 A0A1W2PQJ5 194 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 GPR182O15218 404 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 CHRNA1P02708 482 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 APBA1Q02410 837 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 NNTQ13423 1086 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 BFSP2Q13515 415 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 TRIM71Q2Q1W2 868 aaKnown RBP17.05■□□□□ 0.32
SNX17-204ENST00000453453 FAM26DQ5JW98 314 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
SNX17-204ENST00000453453 BRSK2Q8IWQ3 736 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 DHX38Q92620 1227 aaKnown RBP17.05■□□□□ 0.32
SNX17-204ENST00000453453 SH3GL2Q99962 352 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 TRIM6Q9C030 488 aaPredicted RBP17.05■□□□□ 0.32
SNX17-204ENST00000453453 MMRN2Q9H8L6 949 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 GUCA1BQ9UMX6 200 aa17.05■□□□□ 0.32
SNX17-204ENST00000453453 NOC2LQ9Y3T9 749 aaKnown RBP17.05■□□□□ 0.32
SNX17-204ENST00000453453 GTPBP10A4D1E9 387 aaKnown RBP17.04■□□□□ 0.32
SNX17-204ENST00000453453 P4HA2O15460 535 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 CLTAP09496 248 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
SNX17-204ENST00000453453 GTF2H1P32780 548 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 FMO5P49326 533 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 MCCD1P59942 119 aaPredicted RBP17.04■□□□□ 0.32
SNX17-204ENST00000453453 SKOR1P84550 965 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 MYL7Q01449 175 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 POU5F1Q01860 360 aaKnown RBP17.04■□□□□ 0.32
SNX17-204ENST00000453453 ALS2CLQ60I27 953 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 CRELD2Q6UXH1 353 aaPredicted RBP17.04■□□□□ 0.32
SNX17-204ENST00000453453 KIAA1328Q86T90 577 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 FAM228AQ86W67 206 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 FAM126BQ8IXS8 530 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 USP38Q8NB14 1042 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 SELENOOQ9BVL4 669 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 RPF1Q9H9Y2 349 aaKnown RBP17.04■□□□□ 0.32
SNX17-204ENST00000453453 CPSF3Q9UKF6 684 aaKnown RBP17.04■□□□□ 0.32
SNX17-204ENST00000453453 SQORQ9Y6N5 450 aa17.04■□□□□ 0.32
SNX17-204ENST00000453453 TTC26A0AVF1 554 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 GOLGA6CA6NDK9 693 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 GOLGA6BA6NDN3 693 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 DCDC2CA8MYV0 355 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 EBAG9O00559 213 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 IL18RAPO95256 599 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 NPTXRO95502 500 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
SNX17-204ENST00000453453 GOLGA6DP0CG33 693 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 TRIM21P19474 475 aaKnown RBP17.03■□□□□ 0.32
SNX17-204ENST00000453453 HOXA11P31270 313 aaPredicted RBP17.03■□□□□ 0.32
SNX17-204ENST00000453453 PAK2Q13177 524 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 ZNF618Q5T7W0 954 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 SLC39A5Q6ZMH5 540 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 CHST12Q9NRB3 414 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 GOLGA6AQ9NYA3 693 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 SRRM3A6NNA2 597 aaPredicted RBP17.03■□□□□ 0.32
SNX17-204ENST00000453453 FAM189A1O60320 539 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 PQBP1O60828 265 aaKnown RBP17.03■□□□□ 0.32
SNX17-204ENST00000453453 STAG3L1P0CL83 205 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 CKBP12277 381 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 TNNI1P19237 187 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 MXI1P50539 228 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 AP3M2P53677 418 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 OSTNP61366 133 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 DLG4P78352 724 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 ZBED6P86452 979 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 EXOC3L4Q17RC7 722 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 SEZ6Q53EL9 994 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 FBXO47Q5MNV8 452 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 ZBTB41Q5SVQ8 909 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 EMBQ6PCB8 327 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 CHP1Q99653 195 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms