RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 MTRRQ9UBK8 725 aa20.13■□□□□ 0.81
PDLIM2-214ENST00000452226 PDCD11Q14690 1871 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 I3L4J1 428 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 CCL16O15467 120 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 YEATS4O95619 227 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 PROZP22891 400 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 TKTP29401 623 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 HOXA9P31269 272 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 BRCC3P46736 316 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 AXDND1Q5T1B0 1012 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 SLC7A14Q8TBB6 771 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 SPIRE2Q8WWL2 714 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 RAD54LQ92698 747 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 DDX27Q96GQ7 796 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 SNX27Q96L92 541 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 ZMAT2Q96NC0 199 aaKnown RBP20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 WNT16Q9UBV4 365 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 POLIQ9UNA4 740 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 CDY1Q9Y6F8 540 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 NOTCH4Q99466 2003 aa20.12■□□□□ 0.81
PDLIM2-214ENST00000452226 CFAP54Q96N23 3096 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 ANHXE9PGG2 379 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 ABLIM1O14639 778 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 SPTLC2O15270 562 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 PI15O43692 258 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 PPP6R2O75170 966 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 XYLBO75191 536 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 SRFP11831 508 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 HARSP12081 509 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 PLS3P13797 630 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 AOC1P19801 751 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 DDIT3P35638 169 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 NBL1P41271 181 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 SMTNP53814 917 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 NTHL1P78549 312 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 STRN3Q13033 797 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 HTR4Q13639 388 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 STK38Q15208 465 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 UVSSAQ2YD98 709 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 ATL3Q6DD88 541 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 RSPO2Q6UXX9 243 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 ANKS3Q6ZW76 656 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 ZBTB45Q96K62 511 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 RTP3Q9BQQ7 232 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 KCNG1Q9UIX4 513 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 BACE2Q9Y5Z0 518 aa20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 ZFP37Q9Y6Q3 630 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-214ENST00000452226 STK25O00506 426 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 PODXLO00592 558 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 KCNE1P15382 129 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 RFX1P22670 979 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 MCM6Q14566 821 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 TMEM161BQ8NDZ6 487 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 ST13P5Q8NFI4 369 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 CNTN3Q9P232 1028 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 ANKFY1Q9P2R3 1169 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 CDH7Q9ULB5 785 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 CA14Q9ULX7 337 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 NUMBLQ9Y6R0 609 aa20.1■□□□□ 0.81
PDLIM2-214ENST00000452226 FAM186AA6NE01 2351 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 NPHP3-ACAD11A0A0J9YXS1 232 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 KRBA1A5PL33 1030 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 TOM1L1O75674 476 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 MAPTP10636 758 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 FOXK2Q01167 660 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 NOLC1Q14978 699 aaKnown RBP eCLIP20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 GPBP1Q86WP2 473 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 RASSF8Q8NHQ8 419 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 LARP4BQ92615 738 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 KCNN1Q92952 543 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 NKD2Q969F2 451 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 C18orf25Q96B23 403 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 STK17AQ9UEE5 414 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 CCDC39Q9UFE4 941 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 ODF2LQ9ULJ1 636 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 WDR87Q6ZQQ6 2873 aa20.09■□□□□ 0.81
PDLIM2-214ENST00000452226 MEFVO15553 781 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 POU2F2P09086 479 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 RPL9P32969 192 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 ZNF131P52739 623 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 SEZ6Q53EL9 994 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 RTL10Q7L3V2 364 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 GPR152Q8TDT2 470 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 FGF13Q92913 245 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 REEP2Q9BRK0 252 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 HCFC1R1Q9NWW0 138 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 NUB1Q9Y5A7 615 aa20.08■□□□□ 0.81
PDLIM2-214ENST00000452226 PRR23AA6NEV1 266 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 CLDN3O15551 220 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 TXLNAP40222 546 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 BECN1Q14457 450 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 DHX8Q14562 1220 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 SLC10A6Q3KNW5 377 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 VARS2Q5ST30 1063 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 SLC8B1Q6J4K2 584 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 PARM1Q6UWI2 310 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 ZPBP2Q6X784 338 aa20.07■□□□□ 0.8
PDLIM2-214ENST00000452226 CCDC105Q8IYK2 499 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms