RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PODXLO00592 558 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 ADAM12O43184 909 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 GCNT3O95395 438 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 BRCC3P46736 316 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 AARSP49588 968 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 ACOT2P49753 483 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 NDUFA8P51970 172 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 WNT7BP56706 349 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 NUCB2P80303 420 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 SPAG1Q07617 926 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 ELAVL2Q12926 359 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 CBX2Q14781 532 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 POSTNQ15063 836 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 SPATA1Q5VX52 437 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 PRSS55Q6UWB4 352 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 RSPO2Q6UXX9 243 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 C12orf76Q8N812 135 aaPredicted RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 FBXL18Q96ME1 805 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 BLZF1Q9H2G9 400 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 GOLPH3LQ9H4A5 285 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 RPF1Q9H9Y2 349 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 USP25Q9UHP3 1055 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 CDH22Q9UJ99 828 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 AGO2Q9UKV8 859 aaKnown RBP17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 FAM50BQ9Y247 325 aa17.54■□□□□ 0.4
SCAMP4-205ENST00000452128 LOC730098B7Z3J9 87 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 EIF3DO15371 548 aaKnown RBP eCLIP17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 TGFB1I1O43294 461 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 RPL17P18621 184 aaKnown RBP17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 GARTP22102 1010 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 KLRC2P26717 231 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 ASIC1P78348 528 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 CD302Q8IX05 232 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 GJD3Q8N144 294 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 CMASQ8NFW8 434 aaPredicted RBP17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 SCFD1Q8WVM8 642 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 CBWD1Q9BRT8 395 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 RHOBTB2Q9BYZ6 727 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 ASB7Q9H672 318 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 DZANK1Q9NVP4 752 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 EXOC7Q9UPT5 735 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 DERAQ9Y315 318 aa17.53■□□□□ 0.4
SCAMP4-205ENST00000452128 ANO9A1A5B4 782 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 I3L4J1 428 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 TGM5O43548 720 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 ADH1AP07327 375 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 AFMP43652 599 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 GUCY2FP51841 1108 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 ITIH3Q06033 890 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 BMT2Q1RMZ1 405 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 TPRNQ4KMQ1 711 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 FAM26FQ5R3K3 315 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 JADE1Q6IE81 842 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 KIAA1841Q6NSI8 718 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 CXorf38Q8TB03 319 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 HDAC7Q8WUI4 952 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 KIF12Q96FN5 646 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 SUSD3Q96L08 255 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 TMEM206Q9H813 350 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 MTRRQ9UBK8 725 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 UBQLN1Q9UMX0 589 aaKnown RBP17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 BACE2Q9Y5Z0 518 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 TCHHQ07283 1943 aa17.52■□□□□ 0.4
SCAMP4-205ENST00000452128 CITO14578 2027 aa17.52■□□□□ 0.39
SCAMP4-205ENST00000452128 VWA8A3KMH1 1905 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 M0QZQ0 153 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 PIRO00625 290 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 TRIOO75962 3097 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 NFICP08651 508 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 SRGAP2BP0DMP2 458 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 TKTP29401 623 aaKnown RBP17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 MATR3P43243 847 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 RAB33AQ14088 237 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 GPR149Q86SP6 731 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 POMGNT1Q8WZA1 660 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 APOL5Q9BWW9 433 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 PHF7Q9BWX1 381 aaPredicted RBP17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 C2CD2Q9Y426 696 aa17.51■□□□□ 0.39
SCAMP4-205ENST00000452128 PPEF2O14830 753 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 SYN3O14994 580 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 SYKP43405 635 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 CREMQ03060 361 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 PPP2R3AQ06190 1150 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 PSMD5Q16401 504 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 SCARA3Q6AZY7 606 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 PALB2Q86YC2 1186 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 EFCAB13Q8IY85 973 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 ENGASEQ8NFI3 743 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 ZNF707Q96C28 371 aaPredicted RBP17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 BORCS6Q96GS4 357 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 PLEKHA4Q9H4M7 779 aa17.5■□□□□ 0.39
SCAMP4-205ENST00000452128 PI4K2BG5E9Z4 385 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 SPTLC1O15269 473 aa17.49■□□□□ 0.39
SCAMP4-205ENST00000452128 TRAPPC3O43617 180 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms