RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PARVGQ9HBI0 331 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 GDPD2Q9HCC8 539 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.6■■□□□ 1.37
C9orf3-208ENST00000451893 CCDC39Q9UFE4 941 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 CDY1Q9Y6F8 540 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 MORC2Q9Y6X9 1032 aaPredicted RBP23.6■■□□□ 1.37
C9orf3-208ENST00000451893 STK25O00506 426 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 HNRNPDLO14979 420 aaKnown RBP23.59■■□□□ 1.37
C9orf3-208ENST00000451893 PDGFBP01127 241 aaPredicted RBP23.59■■□□□ 1.37
C9orf3-208ENST00000451893 HNRNPA1P09651 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
C9orf3-208ENST00000451893 FGFR3P22607 806 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 PROZP22891 400 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 FSHRP23945 695 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 ELF1P32519 619 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 BRCC3P46736 316 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 VCPP55072 806 aaKnown RBP23.59■■□□□ 1.37
C9orf3-208ENST00000451893 MCM6Q14566 821 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 SEZ6Q53EL9 994 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 HAUS6Q7Z4H7 955 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 FLCNQ8NFG4 579 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 SLC7A14Q8TBB6 771 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 ZNF707Q96C28 371 aaPredicted RBP23.59■■□□□ 1.37
C9orf3-208ENST00000451893 REEP2Q9BRK0 252 aa23.59■■□□□ 1.37
C9orf3-208ENST00000451893 CCL16O15467 120 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 HOXD11P31277 338 aaPredicted RBP23.58■■□□□ 1.37
C9orf3-208ENST00000451893 RPL9P32969 192 aaKnown RBP23.58■■□□□ 1.37
C9orf3-208ENST00000451893 ARPP19P56211 112 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 PPP2R3AQ06190 1150 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 AXDND1Q5T1B0 1012 aaPredicted RBP23.58■■□□□ 1.37
C9orf3-208ENST00000451893 IER5LQ5T953 404 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 GRASPQ7Z6J2 395 aaPredicted RBP23.58■■□□□ 1.37
C9orf3-208ENST00000451893 LINC00301Q8NCQ3 95 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 LARP4BQ92615 738 aaKnown RBP23.58■■□□□ 1.37
C9orf3-208ENST00000451893 RAD54LQ92698 747 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 IRF2BPLQ9H1B7 796 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 CNTN3Q9P232 1028 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 MTRRQ9UBK8 725 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 DUSP12Q9UNI6 340 aa23.58■■□□□ 1.37
C9orf3-208ENST00000451893 ZDBF2Q9HCK1 2354 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 MYH15Q9Y2K3 1946 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 H7C4K7 107 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 XPOTO43592 962 aaKnown RBP23.57■■□□□ 1.36
C9orf3-208ENST00000451893 KCNE1P15382 129 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 SCP2P22307 547 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 MARCKSP29966 332 aaPredicted RBP23.57■■□□□ 1.36
C9orf3-208ENST00000451893 ABCD1P33897 745 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 NCKAP1LP55160 1127 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 CEBPZQ03701 1054 aaKnown RBP23.57■■□□□ 1.36
C9orf3-208ENST00000451893 SOX4Q06945 474 aaPredicted RBP23.57■■□□□ 1.36
C9orf3-208ENST00000451893 SLC39A14Q15043 492 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 STK38Q15208 465 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 KYAT1Q16773 422 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 ALKAL1Q6UXT8 129 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 KRI1Q8N9T8 703 aaKnown RBP23.57■■□□□ 1.36
C9orf3-208ENST00000451893 PRSS33Q8NF86 280 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 SYAP1Q96A49 352 aaPredicted RBP23.57■■□□□ 1.36
C9orf3-208ENST00000451893 MYADMQ96S97 322 aa23.57■■□□□ 1.36
C9orf3-208ENST00000451893 PDCD11Q14690 1871 aaKnown RBP23.57■■□□□ 1.36
C9orf3-208ENST00000451893 PRRG1O14668 218 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 CXCL8P10145 99 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 MCL1Q07820 350 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 RAB33AQ14088 237 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 ARSHQ5FYA8 562 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 XKR4Q5GH76 650 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 NXPE3Q969Y0 559 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 C18orf25Q96B23 403 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-208ENST00000451893 FAM212AQ96EL1 285 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 KIF12Q96FN5 646 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 ZMAT2Q96NC0 199 aaKnown RBP23.56■■□□□ 1.36
C9orf3-208ENST00000451893 EPS15L1Q9UBC2 864 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 BACE2Q9Y5Z0 518 aa23.56■■□□□ 1.36
C9orf3-208ENST00000451893 TRIOO75962 3097 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 TULP1O00294 542 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-208ENST00000451893 SYN3O14994 580 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 SPTLC2O15270 562 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 ADAM12O43184 909 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 PPP6R2O75170 966 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 LRG1P02750 347 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 CLTAP09496 248 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 HOXA9P31269 272 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 UVSSAQ2YD98 709 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 VARS2Q5ST30 1063 aaKnown RBP23.55■■□□□ 1.36
C9orf3-208ENST00000451893 C3orf58Q8NDZ4 430 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 APPL2Q8NEU8 664 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 GPT2Q8TD30 523 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 RPF1Q9H9Y2 349 aaKnown RBP23.55■■□□□ 1.36
C9orf3-208ENST00000451893 TBX20Q9UMR3 447 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-208ENST00000451893 CLIC4Q9Y696 253 aa23.55■■□□□ 1.36
C9orf3-208ENST00000451893 ZFP37Q9Y6Q3 630 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-208ENST00000451893 ABLIM1O14639 778 aa23.54■■□□□ 1.36
C9orf3-208ENST00000451893 N4BP1O75113 896 aaKnown RBP23.54■■□□□ 1.36
C9orf3-208ENST00000451893 GADD45BO75293 160 aaPredicted RBP23.54■■□□□ 1.36
C9orf3-208ENST00000451893 CFHP08603 1231 aa23.54■■□□□ 1.36
C9orf3-208ENST00000451893 LAMP2P13473 410 aa23.54■■□□□ 1.36
C9orf3-208ENST00000451893 GRIN1Q05586 938 aa23.54■■□□□ 1.36
C9orf3-208ENST00000451893 SPECC1Q5M775 1068 aa23.54■■□□□ 1.36
C9orf3-208ENST00000451893 ASTLQ6HA08 431 aaPredicted RBP23.54■■□□□ 1.36
C9orf3-208ENST00000451893 SIX5Q8N196 739 aa23.54■■□□□ 1.36
C9orf3-208ENST00000451893 RSAD2Q8WXG1 361 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms