RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-217ENST00000450271 ZFHX2Q9C0A1 2572 aaPredicted RBP28.7■■■□□ 2.18
PBRM1-217ENST00000450271 H0YCG3 227 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 SYN3O14994 580 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 PI15O43692 258 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 CFHP08603 1231 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 UBA7P41226 1012 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 GRIN1Q05586 938 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 CUL4AQ13619 759 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 VARS2Q5ST30 1063 aaKnown RBP28.69■■■□□ 2.18
PBRM1-217ENST00000450271 SLC8B1Q6J4K2 584 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 CALML4Q96GE6 196 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 REEP2Q9BRK0 252 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 CDH7Q9ULB5 785 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 NUMBLQ9Y6R0 609 aa28.69■■■□□ 2.18
PBRM1-217ENST00000450271 KRBA1A5PL33 1030 aa28.68■■■□□ 2.18
PBRM1-217ENST00000450271 CLDN3O15551 220 aa28.68■■■□□ 2.18
PBRM1-217ENST00000450271 TBC1D4O60343 1298 aa28.68■■■□□ 2.18
PBRM1-217ENST00000450271 HAUS6Q7Z4H7 955 aa28.68■■■□□ 2.18
PBRM1-217ENST00000450271 GPBP1Q86WP2 473 aa28.68■■■□□ 2.18
PBRM1-217ENST00000450271 POLIQ9UNA4 740 aa28.68■■■□□ 2.18
PBRM1-217ENST00000450271 PLCG1P19174 1290 aa28.67■■■□□ 2.18
PBRM1-217ENST00000450271 LONP1P36776 959 aaKnown RBP28.67■■■□□ 2.18
PBRM1-217ENST00000450271 ZNF131P52739 623 aa28.67■■■□□ 2.18
PBRM1-217ENST00000450271 ROR1Q01973 937 aa28.67■■■□□ 2.18
PBRM1-217ENST00000450271 MRPL58Q14197 206 aaKnown RBP28.67■■■□□ 2.18
PBRM1-217ENST00000450271 SF3A1Q15459 793 aaKnown RBP28.67■■■□□ 2.18
PBRM1-217ENST00000450271 ST13P5Q8NFI4 369 aaPredicted RBP28.67■■■□□ 2.18
PBRM1-217ENST00000450271 ITFG1Q8TB96 612 aa28.67■■■□□ 2.18
PBRM1-217ENST00000450271 FGF13Q92913 245 aa28.67■■■□□ 2.18
PBRM1-217ENST00000450271 HCFC1R1Q9NWW0 138 aa28.67■■■□□ 2.18
PBRM1-217ENST00000450271 DNMT3BQ9UBC3 853 aaKnown RBP28.67■■■□□ 2.18
PBRM1-217ENST00000450271 NOTCH4Q99466 2003 aa28.67■■■□□ 2.18
PBRM1-217ENST00000450271 DMDP11532 3685 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 VPS13AQ96RL7 3174 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 CXCL8P10145 99 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 KARSQ15046 597 aaKnown RBP28.66■■■□□ 2.18
PBRM1-217ENST00000450271 ZNF461Q8TAF7 563 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 FGF14Q92915 247 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 SUSD3Q96L08 255 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 RTP3Q9BQQ7 232 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 RPP25Q9BUL9 199 aaKnown RBP28.66■■■□□ 2.18
PBRM1-217ENST00000450271 PLEKHA5Q9HAU0 1116 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 TUBGCP4Q9UGJ1 667 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 NUB1Q9Y5A7 615 aa28.66■■■□□ 2.18
PBRM1-217ENST00000450271 PDCD11Q14690 1871 aaKnown RBP28.66■■■□□ 2.18
PBRM1-217ENST00000450271 WDR27A2RRH5 827 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 ABLIM3O94929 683 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 CLTAP09496 248 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 MCM6Q14566 821 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 PARM1Q6UWI2 310 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 GPR152Q8TDT2 470 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 RAD54LQ92698 747 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 BICD1Q96G01 975 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 SLC2A4RGQ9NR83 387 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 KCNH3Q9ULD8 1083 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 TBX20Q9UMR3 447 aa28.65■■■□□ 2.18
PBRM1-217ENST00000450271 TTC26A0AVF1 554 aa28.64■■■□□ 2.18
PBRM1-217ENST00000450271 ARHGEF37A1IGU5 675 aa28.64■■■□□ 2.18
PBRM1-217ENST00000450271 PIGRP01833 764 aa28.64■■■□□ 2.18
PBRM1-217ENST00000450271 DHX8Q14562 1220 aaKnown RBP28.64■■■□□ 2.18
PBRM1-217ENST00000450271 PABPC1LQ4VXU2 614 aaKnown RBP28.64■■■□□ 2.18
PBRM1-217ENST00000450271 TMEM130Q8N3G9 435 aa28.64■■■□□ 2.18
PBRM1-217ENST00000450271 PARVGQ9HBI0 331 aa28.64■■■□□ 2.18
PBRM1-217ENST00000450271 FBXL5Q9UKA1 691 aa28.64■■■□□ 2.18
PBRM1-217ENST00000450271 CA14Q9ULX7 337 aa28.64■■■□□ 2.18
PBRM1-217ENST00000450271 H7C4K7 107 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 FAM189A1O60320 539 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 FAM13AO94988 1023 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 SCP2P22307 547 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 MCM4P33991 863 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 TNFSF9P41273 254 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 MATR3P43243 847 aaKnown RBP eCLIP28.63■■■□□ 2.17
PBRM1-217ENST00000450271 LIG4P49917 911 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 ZBTB6Q15916 424 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 CCDC105Q8IYK2 499 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 MYCT1Q8N699 235 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 FIZ1Q96SL8 496 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 CCSER1Q9C0I3 900 aa28.63■■■□□ 2.17
PBRM1-217ENST00000450271 VPS37CA5D8V6 355 aaPredicted RBP28.62■■■□□ 2.17
PBRM1-217ENST00000450271 PROB1E7EW31 1015 aa28.62■■■□□ 2.17
PBRM1-217ENST00000450271 K7ENM7 598 aa28.62■■■□□ 2.17
PBRM1-217ENST00000450271 ATF2P15336 505 aa28.62■■■□□ 2.17
PBRM1-217ENST00000450271 LRPAP1P30533 357 aa28.62■■■□□ 2.17
PBRM1-217ENST00000450271 MTSS1LQ765P7 747 aa28.62■■■□□ 2.17
PBRM1-217ENST00000450271 NPAS3Q8IXF0 933 aa28.62■■■□□ 2.17
PBRM1-217ENST00000450271 DDX12PQ92771 950 aa28.62■■■□□ 2.17
PBRM1-217ENST00000450271 HNRNPDLO14979 420 aaKnown RBP28.61■■■□□ 2.17
PBRM1-217ENST00000450271 SPAG1Q07617 926 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 KYAT1Q16773 422 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 CTXN3Q4LDR2 81 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 ZBTB41Q5SVQ8 909 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 TCEAL8Q8IYN2 117 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 LARP4BQ92615 738 aaKnown RBP28.61■■■□□ 2.17
PBRM1-217ENST00000450271 KIF12Q96FN5 646 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 TBC1D17Q9HA65 648 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 AVENQ9NQS1 362 aaPredicted RBP28.61■■■□□ 2.17
PBRM1-217ENST00000450271 ARHGEF3Q9NR81 526 aa28.61■■■□□ 2.17
PBRM1-217ENST00000450271 RIF1Q5UIP0 2472 aaKnown RBP28.6■■■□□ 2.17
PBRM1-217ENST00000450271 TRAK2O60296 914 aa28.6■■■□□ 2.17
PBRM1-217ENST00000450271 RHOP08100 348 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms