RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZNF398Q8TD17 642 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 RASGRP4Q8TDF6 673 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 SH3RF3Q8TEJ3 882 aaPredicted RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 RFFLQ8WZ73 363 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ALG3Q92685 438 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 NSL1Q96IY1 281 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 DHRS1Q96LJ7 313 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 TCHPQ9BT92 498 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 CYLDQ9NQC7 956 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 AAASQ9NRG9 546 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ZDHHC7Q9NXF8 308 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 TUBA8Q9NY65 449 aaPredicted RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 TAS2R1Q9NYW7 299 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 DNAJB4Q9UDY4 337 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ZNF335Q9H4Z2 1342 aaPredicted RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 KANSL1LA0AUZ9 987 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 MYMKA6NI61 221 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 NDC80O14777 642 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 THAP12O43422 761 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 DDAH1O94760 285 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 BAG2O95816 211 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ACTN1P12814 892 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 VEGFAP15692 232 aaPredicted RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 CTNNA2P26232 953 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 PGM1P36871 562 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 HALP42357 657 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ARFIP2P53365 341 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 GALCP54803 685 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ASPHQ12797 758 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 CTTNQ14247 550 aaKnown RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 AADACL2Q6P093 401 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 TOM1L2Q6ZVM7 507 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 DYMQ7RTS9 669 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 OTOAQ7RTW8 1153 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 NANOGNBQ7Z5D8 188 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 RASSF3Q86WH2 238 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 PDSS2Q86YH6 399 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 CCDC105Q8IYK2 499 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 ALDH16A1Q8IZ83 802 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 GLIS3Q8NEA6 775 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 U2AF1L4Q8WU68 220 aaKnown RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 TTC1Q99614 292 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 STK33Q9BYT3 514 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 UTP6Q9NYH9 597 aaKnown RBP9.14□□□□□ -0.95
LSM5-208ENST00000450169 PCDHA4Q9UN74 947 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 TRAF3IP3Q9Y228 551 aa9.14□□□□□ -0.95
LSM5-208ENST00000450169 RIC1Q4ADV7 1423 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 NCANO14594 1321 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 LSM1O15116 133 aaKnown RBP9.13□□□□□ -0.95
LSM5-208ENST00000450169 PLSCR1O15162 318 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 SPAG7O75391 227 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 ALDH2P05091 517 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 CPA3P15088 417 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 UCHL3P15374 230 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 NAT1P18440 290 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 CETN2P41208 172 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 RPL5P46777 297 aaKnown RBP9.13□□□□□ -0.95
LSM5-208ENST00000450169 RAP1GDS1P52306 607 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 CHN2P52757 468 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 COG7P83436 770 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 PPATQ06203 517 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 MTMR2Q13614 643 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 PDCD4Q53EL6 469 aaKnown RBP9.13□□□□□ -0.95
LSM5-208ENST00000450169 PLEKHG4Q58EX7 1191 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 HSP90AA5PQ58FG0 334 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 METTL24Q5JXM2 366 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 RAPH1Q70E73 1250 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 PATL1Q86TB9 770 aaKnown RBP9.13□□□□□ -0.95
LSM5-208ENST00000450169 TRIM50Q86XT4 487 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 PALB2Q86YC2 1186 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 PIP4K2CQ8TBX8 421 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 FAM161BQ96MY7 647 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 CYTH2Q99418 400 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 NACA2Q9H009 215 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 TBC1D7Q9P0N9 293 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 ARPP21Q9UBL0 812 aaPredicted RBP9.13□□□□□ -0.95
LSM5-208ENST00000450169 GRID1Q9ULK0 1009 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 ZMYM2Q9UBW7 1377 aa9.13□□□□□ -0.95
LSM5-208ENST00000450169 MYH3P11055 1940 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 E9PBE3 544 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 BUD23O43709 281 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 SERPINB7O75635 380 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 USP1O94782 785 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 ESRRAP11474 423 aaPredicted RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 UQCRBP14927 111 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 CHKAP35790 457 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 GCGRP47871 477 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 HDAC4P56524 1084 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 TBL3Q12788 808 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 TMED2Q15363 201 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 TRMT5Q32P41 509 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 THOC7Q6I9Y2 204 aaKnown RBP9.12□□□□□ -0.95
LSM5-208ENST00000450169 CCDC62Q6P9F0 684 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 C3orf62Q6ZUJ4 267 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 LRRC6Q86X45 466 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 MYOCDQ8IZQ8 938 aa9.12□□□□□ -0.95
LSM5-208ENST00000450169 BBS5Q8N3I7 341 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms