RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 KATNAL1Q9BW62 490 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 AP5M1Q9H0R1 490 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 ISCUQ9H1K1 167 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 IFT122Q9HBG6 1241 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 A0A087WZ62 844 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 ABLIM1O14639 778 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 CYP26A1O43174 497 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 SGPL1O95470 568 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 F2P00734 622 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 TNNC2P02585 160 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF865P0CJ78 1059 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 KRT5P13647 590 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 CYP11B1P15538 503 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 H2AFXP16104 143 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 HSPA6P17066 643 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 MCM3P25205 808 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 TM4SF4P48230 202 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 HADHBP55084 474 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 CDR2Q01850 454 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 NCOA4Q13772 614 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 TCEAL1Q15170 157 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF572Q7Z3I7 529 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 TLK2Q86UE8 772 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 KAT5Q92993 513 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 TATDN2Q93075 761 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 ANKRD36BP1Q96IX9 119 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 SCLT1Q96NL6 688 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 FDXACB1Q9BRP7 624 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 ADPGKQ9BRR6 497 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 TLR10Q9BXR5 811 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 RPF1Q9H9Y2 349 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 NOCTQ9UK39 431 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 MGAMO43451 1857 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 GRID2IPA4D2P6 1211 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 CA12O43570 354 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 B4GALT4O60513 344 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 ERLIN2O94905 339 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 VNN1O95497 513 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 GJB1P08034 283 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 CLTAP09496 248 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 TMEM191BP0C7N4 346 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 NDUFV2P19404 249 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 CYP2B6P20813 491 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 DNAJB2P25686 324 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 NOP14P78316 857 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 GPC5P78333 572 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 TRPC3Q13507 836 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 CUL2Q13617 745 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 RPS6KA1Q15418 735 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 CFAP221Q4G0U5 840 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 ZBTB41Q5SVQ8 909 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 LMBRD2Q68DH5 695 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 NOP9Q86U38 636 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 THNSL1Q8IYQ7 743 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 DOCK3Q8IZD9 2030 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 TPCN2Q8NHX9 752 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 FAXDC2Q96IV6 333 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 CAPZA3Q96KX2 299 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 PI4K2AQ9BTU6 479 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 SELENOOQ9BVL4 669 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 CDT1Q9H211 546 aa11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 ABT1Q9ULW3 272 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-203ENST00000448935 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 FAM155AB1AL88 458 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 KPNA6O60684 536 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 SRGAP2O75044 1071 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 CLSTN1O94985 981 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 FTLP02792 175 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 NUDT7P0C024 238 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 TNFSF9P41273 254 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 FCGRTP55899 365 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 YWHAEP62258 255 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 CRHR2Q13324 411 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 BRD3Q15059 726 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 NFRKBQ6P4R8 1299 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 TRIM72Q6ZMU5 477 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 PEX26Q7Z412 305 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 SLFN11Q7Z7L1 901 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 SLC47A2Q86VL8 602 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 MSANTD4Q8NCY6 345 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 SMC1BQ8NDV3 1235 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 OR5B17Q8NGF7 314 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 SLC35G2Q8TBE7 412 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 SLC20A1Q8WUM9 679 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 TRIM11Q96F44 468 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 PBKQ96KB5 322 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 GCOM2Q9BZD3 368 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 PDCL3Q9H2J4 239 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 ASB7Q9H672 318 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 GJD2Q9UKL4 321 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 ANK1P16157 1881 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 PTPRJQ12913 1337 aa11.33□□□□□ -0.6
VIPAS39-203ENST00000448935 SMIM35A0A1B0GVV1 85 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 B4GALT5O43286 388 aa11.32□□□□□ -0.6
VIPAS39-203ENST00000448935 RRP9O43818 475 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms