RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 DCLK3Q9C098 648 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 C1orf112Q9NSG2 853 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 FBXO28Q9NVF7 368 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
CHRD-205ENST00000448472 ZFP69BQ9UJL9 534 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 ZMYND8Q9ULU4 1186 aaPredicted RBP16.8■□□□□ 0.28
CHRD-205ENST00000448472 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 IGLV3-22A0A075B6J6 115 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 CFAP69A5D8W1 941 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 ATP2A1O14983 1001 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 ADRB2P07550 413 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 RASSF2P50749 326 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 MGAT5Q09328 741 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 STAT4Q14765 748 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 ACAD10Q6JQN1 1059 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 OSBPL8Q9BZF1 889 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 NEU2Q9Y3R4 380 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 CTDP1Q9Y5B0 961 aaPredicted RBP16.8■□□□□ 0.28
CHRD-205ENST00000448472 CLRN2A0PK11 232 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 HNRNPDLO14979 420 aaKnown RBP16.8■□□□□ 0.28
CHRD-205ENST00000448472 MAN1A1P33908 653 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 SOX10P56693 466 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 FBXL13Q8NEE6 735 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 FNBP1Q96RU3 617 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 HERPUD2Q9BSE4 406 aa16.8■□□□□ 0.28
CHRD-205ENST00000448472 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.281e-8■□□□□ 10.8
CHRD-205ENST00000448472 DDX60LQ5H9U9 1706 aaKnown RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 LRRD1A4D1F6 860 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 SGK1O00141 431 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 ETS1P14921 441 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 C15orf52Q6ZUT6 534 aaKnown RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 FAM71AQ8IYT1 594 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 DAW1Q8N136 415 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 TTC8Q8TAM2 541 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 SPIRE2Q8WWL2 714 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 FIZ1Q96SL8 496 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 METTL5Q9NRN9 209 aaKnown RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 PPP1R12AO14974 1030 aaPredicted RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 ARSEP51690 589 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 POLGP54098 1239 aaPredicted RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 ATP13A4Q4VNC1 1196 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 WDR44Q5JSH3 913 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 SYCP2LQ5T4T6 812 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 LIN9Q5TKA1 542 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 FAM213AQ9BRX8 229 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 SLC5A4Q9NY91 659 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 NOCTQ9UK39 431 aaKnown RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 FSCN2O14926 492 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 WDR4P57081 412 aaKnown RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 TAF1BQ53T94 588 aaPredicted RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 GRAMD1AQ96CP6 724 aa16.79■□□□□ 0.28
CHRD-205ENST00000448472 C12orf65Q9H3J6 166 aaKnown RBP16.79■□□□□ 0.28
CHRD-205ENST00000448472 DENND3A2RUS2 1198 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 DCTN3O75935 186 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 CYP3A4P08684 503 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 ALAS1P13196 640 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 RPA3P35244 121 aaPredicted RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 CTCFP49711 727 aaPredicted RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 PDIA2Q13087 525 aaKnown RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 SIX1Q15475 284 aaPredicted RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 PCNX4Q63HM2 1172 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 LVRNQ6Q4G3 990 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 SIAH1Q8IUQ4 282 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 MAB21L3Q8N8X9 362 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 SPDYE1Q8NFV5 336 aaPredicted RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 VTI1AQ96AJ9 217 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 TBC1D10AQ9BXI6 508 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 ZHX2Q9Y6X8 837 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 MYH11P35749 1972 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 BANF1O75531 89 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 SATB1Q01826 763 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 CAV1Q03135 178 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 BIRC2Q13490 618 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 SLC15A2Q16348 729 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 GALNTL6Q49A17 601 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 THEMIS2Q5TEJ8 643 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 MRPL11Q9Y3B7 192 aaKnown RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 TROVE2P10155 538 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHRD-205ENST00000448472 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 FASTKD3Q14CZ7 662 aaKnown RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 CYP1B1Q16678 543 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 MTDHQ86UE4 582 aaKnown RBP16.78■□□□□ 0.28
CHRD-205ENST00000448472 BBOF1Q8ND07 529 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 CRYGNQ8WXF5 182 aa16.78■□□□□ 0.28
CHRD-205ENST00000448472 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.28
CHRD-205ENST00000448472 CYP1A2P05177 515 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 CNGA1P29973 690 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 PTK6Q13882 451 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 DCUN1D2Q6PH85 259 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 USP37Q86T82 979 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 CD101Q93033 1021 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 STMN2Q93045 179 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 KMT5AQ9NQR1 393 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 ZFATQ9P243 1243 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 CHKBQ9Y259 395 aa16.77■□□□□ 0.28
CHRD-205ENST00000448472 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms