RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 UBQLN1Q9UMX0 589 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-203ENST00000447216 AFPP02771 609 aaKnown RBP19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 C4BPAP04003 597 aaKnown RBP19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 BMP8BP34820 402 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 HTRA4P83105 476 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 FANCCQ00597 558 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 BIRC3Q13489 604 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 BTG3Q14201 252 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 VWA3BQ502W6 1294 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 TDRD10Q5VZ19 366 aaKnown RBP19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 SV2AQ7L0J3 742 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 TRAPPC11Q7Z392 1133 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 NT5DC4Q86YG4 428 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 C1orf127Q8N9H9 656 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 NRDE2Q9H7Z3 1164 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 KANSL3Q9P2N6 904 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 DNAJB4Q9UDY4 337 aa19.44■□□□□ 0.7
TRAPPC4-203ENST00000447216 LCHNA4D1U4 455 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 PPEF2O14830 753 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 XPOTO43592 962 aaKnown RBP19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 TLL1O43897 1013 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 STX10O60499 249 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 FMO5P49326 533 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 MXI1P50539 228 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 TUSC3Q13454 348 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 CMTR2Q8IYT2 770 aaKnown RBP19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 LRRC43Q8N309 656 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 FAM193BQ96PV7 902 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 TSPAN18Q96SJ8 248 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 RAD9AQ99638 391 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 PAAF1Q9BRP4 392 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 MRPL9Q9BYD2 267 aaKnown RBP19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 NDST4Q9H3R1 872 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 CWH43Q9H720 699 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 TMEM8AQ9HCN3 771 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 SLC38A7Q9NVC3 462 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 SIX4Q9UIU6 781 aa19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 MRPL42Q9Y6G3 142 aaKnown RBP19.43■□□□□ 0.7
TRAPPC4-203ENST00000447216 ZC3H11AO75152 810 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 PHACTR2O75167 634 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 VNN1O95497 513 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 SERPINC1P01008 464 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 ITGB3P05106 788 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 MYOGP15173 224 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 IGFBP6P24592 240 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 POLR2BP30876 1174 aaKnown RBP19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 GTF2H1P32780 548 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 PLCB2Q00722 1185 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 MYL7Q01449 175 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 DSC1Q08554 894 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 ZACNQ401N2 412 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 C15orf39Q6ZRI6 1047 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 COLGALT2Q8IYK4 626 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 ELMO3Q96BJ8 720 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 NAP1L5Q96NT1 182 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.42■□□□□ 0.71e-22■■■■■ 419.2
TRAPPC4-203ENST00000447216 INSL6Q9Y581 213 aa19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 LAMA2P24043 3122 aaKnown RBP19.42■□□□□ 0.7
TRAPPC4-203ENST00000447216 LRRC10BA6NIK2 292 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 AP5Z1O43299 807 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 LRRN2O75325 713 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 CST3P01034 146 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 HLA-DRAP01903 254 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 TPM2P07951 284 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 KRT19P08727 400 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 CYP3A5P20815 502 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 PBX3P40426 434 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 AP3M2P53677 418 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 SPOUT1Q5T280 376 aaKnown RBP19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 KRT39Q6A163 491 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 TDHQ8IZJ6 230 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 CXorf38Q8TB03 319 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 TAS1R2Q8TE23 839 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 SEMA4DQ92854 862 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 PRO3102Q9H379 93 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 IFNKQ9P0W0 207 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 AGAP1Q9UPQ3 857 aa19.41■□□□□ 0.7
TRAPPC4-203ENST00000447216 LGALS16A8MUM7 142 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 F8W810 466 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 PODXLO00592 558 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 LRPAP1P30533 357 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 PIK3CAP42336 1068 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 OR1G1P47890 313 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 SLC11A1P49279 550 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 CLCNKBP51801 687 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 PTPN21Q16825 1174 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 C9orf57Q5W0N0 161 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 FIBCD1Q8N539 461 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 RSPH1Q8WYR4 309 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 CRACR2AQ9BSW2 395 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 ITGA11Q9UKX5 1188 aa19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 PRG3Q9Y2Y8 225 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC4-203ENST00000447216 ANO9A1A5B4 782 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 NT5C1B-RDH14C9J2C7 533 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 TEX33O43247 280 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 N4BP1O75113 896 aaKnown RBP19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 ARHGEF15O94989 841 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 PBX2P40425 430 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 BCAR1P56945 870 aa19.39■□□□□ 0.69
TRAPPC4-203ENST00000447216 UBASH3AP57075 661 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms