RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SRBD1Q8N5C6 995 aaKnown RBP9.01□□□□□ -0.97
PTPN3-204ENST00000446349 NDFIP2Q9NV92 336 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 CPSF2Q9P2I0 782 aaKnown RBP9.01□□□□□ -0.97
PTPN3-204ENST00000446349 PCDHB2Q9Y5E7 798 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 SALL1Q9NSC2 1324 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 E9PMD0 336 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 TAF2Q6P1X5 1199 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 YME1L1Q96TA2 773 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 SAMSN1Q9NSI8 373 aaKnown RBP9.01□□□□□ -0.97
PTPN3-204ENST00000446349 HACD3Q9P035 362 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 SLC30A1Q9Y6M5 507 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 SPACA6W5XKT8 324 aa9.01□□□□□ -0.97
PTPN3-204ENST00000446349 ADAMTS13Q76LX8 1427 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 FBXO21O94952 628 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 FTLP02792 175 aaPredicted RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 CDH6P55285 790 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 DCLK2Q8N568 766 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 GPT2Q8TD30 523 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 TRAIPQ9BWF2 469 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 BCORL1Q5H9F3 1711 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 ALDH1A2O94788 518 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 ATICP31939 592 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 PRUNE1Q86TP1 453 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 HERC6Q8IVU3 1022 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 BUD13Q9BRD0 619 aaKnown RBP eCLIP9□□□□□ -0.97
PTPN3-204ENST00000446349 MUC3BQ9H195 1237 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 GIMAP4Q9NUV9 329 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 CHCHD3Q9NX63 227 aaKnown RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 SLC25A13Q9UJS0 675 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 HNRNPCL1O60812 293 aaKnown RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 WDR72Q3MJ13 1102 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 THEMIS2Q5TEJ8 643 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 AGPAT1Q99943 283 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 BAG2O95816 211 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 AARS2Q5JTZ9 985 aaKnown RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 TIGD7Q6NT04 549 aaPredicted RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 ANKRD13CQ8N6S4 541 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 PHF20Q9BVI0 1012 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 ECT2Q9H8V3 914 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 PLSCR1O15162 318 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 EPHB3P54753 998 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 C11orf70Q9BRQ4 267 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 SAYSD1Q9NPB0 183 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 INTUQ9ULD6 942 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 SSU72P8A0A1W2PR75 194 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 HNRNPCL2B2RXH8 293 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 SLC12A1Q13621 1099 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 PTK6Q13882 451 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF394Q53GI3 561 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 BCAS4Q8TDM0 211 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 RSAD1Q9HA92 442 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 STARD7Q9NQZ5 370 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 EZH2Q15910 746 aaKnown RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 SNRNP35Q16560 246 aaKnown RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 NIPA1Q7RTP0 329 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 OR6P1Q8NGX9 317 aa9□□□□□ -0.97
PTPN3-204ENST00000446349 UXTQ9UBK9 157 aaPredicted RBP9□□□□□ -0.97
PTPN3-204ENST00000446349 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 DYRK3O43781 588 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 HDAC4P56524 1084 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ACTR2P61160 394 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 NIF3L1Q9GZT8 377 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 SUDS3Q9H7L9 328 aaPredicted RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ENTPD7Q9NQZ7 604 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 AMHP03971 560 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 AARSP49588 968 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 RAPGEF5Q92565 580 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 TMEM60Q9H2L4 133 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 HGSO14964 777 aaPredicted RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ANXA9O76027 345 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 MAPTP10636 758 aaKnown RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 RRM2BQ7LG56 351 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 MRIQ9BWK5 157 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 SNX9Q9Y5X1 595 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 OPHN1O60890 802 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 NDUFS3O75489 264 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF135P52742 658 aaPredicted RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 NCKAP1LP55160 1127 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 MGAT5BQ3V5L5 792 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 TAS2R42Q7RTR8 314 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 RASSF3Q86WH2 238 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 SIRT2Q8IXJ6 389 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 OR9Q1Q8NGQ5 310 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ATL2Q8NHH9 583 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 HTATIP2Q9BUP3 242 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 STK38LQ9Y2H1 464 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 TMEM131LA2VDJ0 1609 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ITIH6Q6UXX5 1313 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 DFFAO00273 331 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ESRRAP11474 423 aaPredicted RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 GNL1P36915 607 aaPredicted RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 MYBPC2Q14324 1141 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 TNIP2Q8NFZ5 429 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 SLC26A7Q8TE54 656 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ARHGEF26Q96DR7 871 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 MCCC1Q96RQ3 725 aaPredicted RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 BAIAP2L1Q9UHR4 511 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 FTCDO95954 541 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms