RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	RARG	P13631	454 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	KCNT1	Q5JUK3	1230 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	RHOT2	Q8IXI1	618 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	LMO3	Q8TAP4	145 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	EPAS1	Q99814	870 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	KCNH7	Q9NS40	1196 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	COL20A1	Q9P218	1284 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	DENND3	A2RUS2	1198 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	BBOX1	O75936	387 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	PAX3	P23760	479 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	RAD23B	P54727	409 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	AP3B2	Q13367	1082 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	ORC2	Q13416	577 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	SNRNP35	Q16560	246 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	C1orf220	Q5T0J3	134 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	TRIM42	Q8IWZ5	723 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	TEKT3	Q9BXF9	490 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	MAF1	Q9H063	256 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	LARS	Q9P2J5	1176 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-238	ENST00000446312	CCPG1	Q9ULG6	757 aa		13.32	□□□□□ -0.28
DDR1-238	ENST00000446312		A0A0A6YYK5	440 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	HNRNPDL	O14979	420 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	PSMD10	O75832	226 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	PLS3	P13797	630 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	GAP43	P17677	238 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	OSTN	P61366	133 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	LACTB	P83111	547 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	SPP2	Q13103	211 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	SEPT7	Q16181	437 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	CGB2	Q6NT52	195 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	BZW1	Q7L1Q6	419 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	ZBED8	Q8IZ13	594 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	PGM2	Q96G03	612 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	C15orf41	Q9Y2V0	281 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	BTNL10	A8MVZ5	291 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	NCAN	O14594	1321 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	MAGEA8	P43361	318 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	GPS1	Q13098	491 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	TXNRD3NB	Q6F5E7	133 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	TMEM270	Q6UE05	265 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	LDHD	Q86WU2	507 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	PRR11	Q96HE9	360 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	ZBTB45	Q96K62	511 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	TMEM39B	Q9GZU3	492 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	UBN1	Q9NPG3	1134 aa		13.31	□□□□□ -0.28
DDR1-238	ENST00000446312	ZBED4	O75132	1171 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	DNAJC8	O75937	253 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	NUDT17	P0C025	328 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	FAM163B	P0C2L3	166 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	PIK3CA	P42336	1068 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	GCLC	P48506	637 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	WDR4	P57081	412 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	ZRSR2	Q15696	482 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312		Q4G0T1	1027 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	ARHGAP22	Q7Z5H3	698 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	COA1	Q9GZY4	146 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	OLFML3	Q9NRN5	406 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	ADAM22	Q9P0K1	906 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	NENF	Q9UMX5	172 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	CFAP69	A5D8W1	941 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	PODXL	O00592	558 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	KIT	P10721	976 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	RPA3	P35244	121 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	WNT7B	P56706	349 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	RPL7A	P62424	266 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	ATP11A	P98196	1134 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	SLMAP	Q14BN4	828 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	PRAMEF18	Q5VWM3	479 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	RINL	Q6ZS11	566 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	STXBP4	Q6ZWJ1	553 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	NCAPG2	Q86XI2	1143 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	COL23A1	Q86Y22	540 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	ART4	Q93070	314 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	FAM163A	Q96GL9	167 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	TMEM121	Q9BTD3	319 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	KIAA1683	Q9H0B3	1180 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	ZWILCH	Q9H900	591 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	BLOC1S6	Q9UL45	172 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	SLC12A4	Q9UP95	1085 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	DNAH12	Q6ZR08	3092 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	CCDC195	A0A1B0GUA6	201 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	CYP3A7	P24462	503 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	SSTR1	P30872	391 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	PLCB4	Q15147	1175 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	LACTB2	Q53H82	288 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	NT5C1B	Q96P26	610 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	PPP1R16B	Q96T49	567 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	NOP53	Q9NZM5	478 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	MARCO	Q9UEW3	520 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	GTF3C4	Q9UKN8	822 aa		13.3	□□□□□ -0.28
DDR1-238	ENST00000446312	UMODL1	Q5DID0	1318 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	TTC4	O95801	387 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	PAEP	P09466	180 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	CTNNA2	P26232	953 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ADSS	P30520	456 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	SIX1	Q15475	284 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ANKRD20A2	Q5SQ80	823 aa		13.29	□□□□□ -0.28

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