RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 PTPN5P54829 565 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 TCF15Q12870 199 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 TDGQ13569 410 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 PSMD5Q16401 504 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 SEZ6Q53EL9 994 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 XKR4Q5GH76 650 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 ATL3Q6DD88 541 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 CD300LGQ6UXG3 332 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 ALKAL1Q6UXT8 129 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 STAMQ92783 540 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 DHX58Q96C10 678 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 SNX27Q96L92 541 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 ACAP3Q96P50 834 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 FIZ1Q96SL8 496 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 IGSF9Q9P2J2 1179 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 MTCL1Q9Y4B5 1905 aaKnown RBP15.29■□□□□ 0.04
TREX1-202ENST00000444177 TRIP11Q15643 1979 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 TMEM189-UBE2V1I3L0A0 370 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 ADAM12O43184 909 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 IDEP14735 1019 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 GAP43P17677 238 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 FGFR3P22607 806 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 GBP2P32456 591 aaPredicted RBP15.28■□□□□ 0.04
TREX1-202ENST00000444177 ABCD1P33897 745 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 MRE11P49959 708 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 CLCNKBP51801 687 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 MCL1Q07820 350 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 UPP1Q16831 310 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 PDXDC1Q6P996 788 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.28■□□□□ 0.04
TREX1-202ENST00000444177 MAP4K3Q8IVH8 894 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 KCNN1Q92952 543 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 UROC1Q96N76 676 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 MYADMQ96S97 322 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 EPS15L1Q9UBC2 864 aa15.28■□□□□ 0.04
TREX1-202ENST00000444177 DENND4AQ7Z401 1863 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 PIGRP01833 764 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 GTF2BQ00403 316 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 SOX4Q06945 474 aaPredicted RBP15.27■□□□□ 0.04
TREX1-202ENST00000444177 ZC2HC1CQ53FD0 456 aaPredicted RBP15.27■□□□□ 0.04
TREX1-202ENST00000444177 AXDND1Q5T1B0 1012 aaPredicted RBP15.27■□□□□ 0.04
TREX1-202ENST00000444177 DNAJC19Q96DA6 116 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 HAPLN2Q9GZV7 340 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 TNMDQ9H2S6 317 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 CUEDC2Q9H467 287 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 MRPL44Q9H9J2 332 aaKnown RBP15.27■□□□□ 0.04
TREX1-202ENST00000444177 GOLGA2P5Q9HBQ8 144 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 FAM13BQ9NYF5 915 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.27■□□□□ 0.04
TREX1-202ENST00000444177 TBC1D7Q9P0N9 293 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 CNTN3Q9P232 1028 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 SEL1LQ9UBV2 794 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 FBXW11Q9UKB1 542 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 ZDHHC9Q9Y397 364 aa15.27■□□□□ 0.04
TREX1-202ENST00000444177 DOCK6Q96HP0 2047 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 CXCL8P10145 99 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 KCNE1P15382 129 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 OR1D2P34982 312 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 NUBP1P53384 320 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 KRT85P78386 507 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 NUCB2P80303 420 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 RAB33AQ14088 237 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 E2F4Q16254 413 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 C3orf58Q8NDZ4 430 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 RSAD2Q8WXG1 361 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 DDX27Q96GQ7 796 aaKnown RBP15.26■□□□□ 0.03
TREX1-202ENST00000444177 CHAMP1Q96JM3 812 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 ZMAT2Q96NC0 199 aaKnown RBP15.26■□□□□ 0.03
TREX1-202ENST00000444177 PHOX2BQ99453 314 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 LRRC27Q9C0I9 530 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 SLC38A7Q9NVC3 462 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 PANK4Q9NVE7 773 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 MTRRQ9UBK8 725 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 PTPRZ1P23471 2315 aaPredicted RBP15.26■□□□□ 0.03
TREX1-202ENST00000444177 CITO14578 2027 aa15.26■□□□□ 0.03
TREX1-202ENST00000444177 DOCK8Q8NF50 2099 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 POLR2DO15514 142 aaKnown RBP15.25■□□□□ 0.03
TREX1-202ENST00000444177 MEFVO15553 781 aaPredicted RBP15.25■□□□□ 0.03
TREX1-202ENST00000444177 GCNT3O95395 438 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 CLTAP09496 248 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 HNRNPA1P09651 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
TREX1-202ENST00000444177 LAMP2P13473 410 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
TREX1-202ENST00000444177 TNFSF9P41273 254 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 BRCC3P46736 316 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 PPP2R3AQ06190 1150 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 LIN9Q5TKA1 542 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 RESP18Q5W5W9 173 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
TREX1-202ENST00000444177 RSPO2Q6UXX9 243 aaPredicted RBP15.25■□□□□ 0.03
TREX1-202ENST00000444177 ZNF720Q7Z2F6 126 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 CCDC65Q8IXS2 484 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 SLC44A3Q8N4M1 653 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 TMEM105Q8N8V8 129 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 HVCN1Q96D96 273 aa15.25■□□□□ 0.03
TREX1-202ENST00000444177 SPATA32Q96LK8 384 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms