RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 FNTBP49356 437 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 SATB1Q01826 763 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 ROR1Q01973 937 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 LRRC32Q14392 662 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 PRSS36Q5K4E3 855 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 CDCA2Q69YH5 1023 aaPredicted RBP16.36■□□□□ 0.21
MRPL40-202ENST00000443660 SLC8B1Q6J4K2 584 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 C1orf228Q6PIY5 440 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 POTEHQ6S545 545 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 CEP68Q76N32 757 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 APBB1IPQ7Z5R6 666 aaPredicted RBP16.36■□□□□ 0.21
MRPL40-202ENST00000443660 LONP2Q86WA8 852 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 CSGALNACT1Q8TDX6 532 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 TCEAL4Q96EI5 215 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 DDX27Q96GQ7 796 aaKnown RBP16.36■□□□□ 0.21
MRPL40-202ENST00000443660 ZNF512Q96ME7 567 aaPredicted RBP16.36■□□□□ 0.21
MRPL40-202ENST00000443660 LARP6Q9BRS8 491 aaKnown RBP16.36■□□□□ 0.21
MRPL40-202ENST00000443660 TTC12Q9H892 705 aaPredicted RBP16.36■□□□□ 0.21
MRPL40-202ENST00000443660 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
MRPL40-202ENST00000443660 A0A087WWV3 80 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 TTLL13PA6NNM8 815 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 H7C4K7 107 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 I3L4J1 428 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 PRKCBP05771 671 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 MLLT6P55198 1093 aaPredicted RBP16.35■□□□□ 0.21
MRPL40-202ENST00000443660 CALCRLQ16602 461 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 UPP1Q16831 310 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 DCAF4L1Q3SXM0 396 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 GLRA4Q5JXX5 417 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 VITQ6UXI7 678 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 YAF2Q8IY57 180 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 TCEAL8Q8IYN2 117 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 DEPTORQ8TB45 409 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 E2F7Q96AV8 911 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 MSANTD3Q96H12 275 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
MRPL40-202ENST00000443660 CHD8Q9HCK8 2581 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 WDR27A2RRH5 827 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 IGFBP6P24592 240 aaPredicted RBP16.34■□□□□ 0.21
MRPL40-202ENST00000443660 VIPR2P41587 438 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 TXKP42681 527 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 BRCC3P46736 316 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 AASDHQ4L235 1098 aaPredicted RBP16.34■□□□□ 0.21
MRPL40-202ENST00000443660 HEATR6Q6AI08 1181 aaKnown RBP16.34■□□□□ 0.21
MRPL40-202ENST00000443660 MFSD6LQ8IWD5 586 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 ZSWIM3Q96MP5 696 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 PPP1R10Q96QC0 940 aaKnown RBP16.34■□□□□ 0.21
MRPL40-202ENST00000443660 GPR88Q9GZN0 384 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 INSL5Q9Y5Q6 135 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 DOCK6Q96HP0 2047 aa16.34■□□□□ 0.21
MRPL40-202ENST00000443660 REC8O95072 547 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 MYL4P12829 197 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 KPNA1P52294 538 aaPredicted RBP16.33■□□□□ 0.2
MRPL40-202ENST00000443660 YARSP54577 528 aaKnown RBP16.33■□□□□ 0.2
MRPL40-202ENST00000443660 SRSF5Q13243 272 aaKnown RBP16.33■□□□□ 0.2
MRPL40-202ENST00000443660 PTGDRQ13258 359 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 N4BP2L1Q5TBK1 243 aaPredicted RBP16.33■□□□□ 0.2
MRPL40-202ENST00000443660 TPGS2Q68CL5 300 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 CD300LGQ6UXG3 332 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 C12orf50Q8NA57 414 aaPredicted RBP16.33■□□□□ 0.2
MRPL40-202ENST00000443660 LEMD2Q8NC56 503 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 ZSCAN18Q8TBC5 510 aaPredicted RBP16.33■□□□□ 0.2
MRPL40-202ENST00000443660 C8orf33Q9H7E9 229 aaPredicted RBP16.33■□□□□ 0.2
MRPL40-202ENST00000443660 TRPV4Q9HBA0 871 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 BRMS1Q9HCU9 246 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 USP20Q9Y2K6 914 aa16.33■□□□□ 0.2
MRPL40-202ENST00000443660 SMIM28A0A1B0GU29 152 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 SYN3O14994 580 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 PAPSS2O95340 614 aaPredicted RBP16.32■□□□□ 0.2
MRPL40-202ENST00000443660 SEC24AO95486 1093 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 CCR2P41597 374 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 NAMPTP43490 491 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 GAS6Q14393 721 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 PPP2R5AQ15172 486 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 EARS2Q5JPH6 523 aaKnown RBP16.32■□□□□ 0.2
MRPL40-202ENST00000443660 DGKKQ5KSL6 1271 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 EEF1DP3Q658K8 133 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 ZFHX4Q86UP3 3567 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 SKAP1Q86WV1 359 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 HS6ST3Q8IZP7 471 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 FAM160A2Q8N612 972 aaPredicted RBP16.32■□□□□ 0.2
MRPL40-202ENST00000443660 FAM200AQ8TCP9 573 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 CHD6Q8TD26 2715 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 WASF1Q92558 559 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 NACC1Q96RE7 527 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 SLITRK6Q9H5Y7 841 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 GOLGA2P5Q9HBQ8 144 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 ASAH2Q9NR71 780 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 TOPORSQ9NS56 1045 aaPredicted RBP16.32■□□□□ 0.2
MRPL40-202ENST00000443660 GJB4Q9NTQ9 266 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 SLC38A7Q9NVC3 462 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 MAFFQ9ULX9 164 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 NUB1Q9Y5A7 615 aa16.32■□□□□ 0.2
MRPL40-202ENST00000443660 MAP1BP46821 2468 aaKnown RBP16.31■□□□□ 0.2
MRPL40-202ENST00000443660 HEPACAM2A8MVW5 462 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 AXIN1O15169 862 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 PMLP29590 882 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 KRT2P35908 639 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 EFNA5P52803 228 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms