RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ASB10Q8WXI3 467 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 FBXO34Q9NWN3 711 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 EPN1Q9Y6I3 576 aaPredicted RBP6.09□□□□□ -1.43
VPS50-206ENST00000443443 MT-CO1P00395 513 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 AMY1AP04745 511 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 CKBP12277 381 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 ALAS1P13196 640 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 FGFR4P22455 802 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 OCA2Q04671 838 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 KRTAP1-1Q07627 177 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 ATP2B3Q16720 1220 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 CCDC181Q5TID7 509 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 STRIP1Q5VSL9 837 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 SEM1Q6ZVN7 128 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 RSPH3Q86UC2 560 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 SLC44A3Q8N4M1 653 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 ZGPATQ8N5A5 531 aaKnown RBP6.08□□□□□ -1.44
VPS50-206ENST00000443443 FITM2Q8N6M3 262 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 MARS2Q96GW9 593 aaKnown RBP6.08□□□□□ -1.44
VPS50-206ENST00000443443 COQ10AQ96MF6 247 aa6.08□□□□□ -1.44
VPS50-206ENST00000443443 ZNF277Q9NRM2 450 aaPredicted RBP6.08□□□□□ -1.44
VPS50-206ENST00000443443 MARCH11A6NNE9 402 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 ZAR1LA6NP61 321 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 K7ESF4 209 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 XPOTO43592 962 aaKnown RBP6.07□□□□□ -1.44
VPS50-206ENST00000443443 MYBL2P10244 700 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 EGR2P11161 476 aaPredicted RBP6.07□□□□□ -1.44
VPS50-206ENST00000443443 GCSHP23434 173 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 ADRA1BP35368 520 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 PLA2G5P39877 138 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 IARSP41252 1262 aaKnown RBP6.07□□□□□ -1.44
VPS50-206ENST00000443443 SEC24CP53992 1094 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 IGBP1P78318 339 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 ITKQ08881 620 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 MTM1Q13496 603 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 ERCC6LQ2NKX8 1250 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 B3GNTL1Q67FW5 361 aaPredicted RBP6.07□□□□□ -1.44
VPS50-206ENST00000443443 DPY19L2P1Q6NXN4 242 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 GPR149Q86SP6 731 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 FAM43AQ8N2R8 423 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 TBC1D15Q8TC07 691 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 RAB24Q969Q5 203 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 TBCCD1Q9NVR7 557 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 SYBUQ9NX95 663 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 USP25Q9UHP3 1055 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 PCDHA13Q9Y5I0 950 aa6.07□□□□□ -1.44
VPS50-206ENST00000443443 POLR2AP24928 1970 aaKnown RBP6.07□□□□□ -1.44
VPS50-206ENST00000443443 hCG_2014768A0A024R1R8 64 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 KLHL33A6NCF5 533 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 TRIM75PA6NK02 468 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 NDUFS2O75306 463 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 CXCR5P32302 372 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 GUCY2FP51841 1108 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 CXADRP78310 365 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 BLOC1S1P78537 153 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 FOXI1Q12951 378 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 MIGA2Q7L4E1 593 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 ZNF575Q86XF7 245 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 LINC00476Q8WZB0 136 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 JADE3Q92613 823 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 BOD1Q96IK1 185 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 FAXDC2Q96IV6 333 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 TMX3Q96JJ7 454 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 Q96MF0 132 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 GALNT9Q9HCQ5 603 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 CASS4Q9NQ75 786 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 TDP1Q9NUW8 608 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 FAM30AQ9NZY2 134 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 SBNO2Q9Y2G9 1366 aa6.06□□□□□ -1.44
VPS50-206ENST00000443443 CCDC78A2IDD5 438 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 CDHR4A6H8M9 788 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 IBSPP21815 317 aaPredicted RBP6.05□□□□□ -1.44
VPS50-206ENST00000443443 TGM1P22735 817 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 SLC16A1P53985 500 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 MPP3Q13368 585 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 FAM50AQ14320 339 aaKnown RBP6.05□□□□□ -1.44
VPS50-206ENST00000443443 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.05□□□□□ -1.44
VPS50-206ENST00000443443 NECAB2Q7Z6G3 386 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 C1orf162Q8NEQ5 155 aaPredicted RBP6.05□□□□□ -1.44
VPS50-206ENST00000443443 SSH1Q8WYL5 1049 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 PTCD3Q96EY7 689 aaKnown RBP6.05□□□□□ -1.44
VPS50-206ENST00000443443 CCDC8Q9H0W5 538 aaPredicted RBP6.05□□□□□ -1.44
VPS50-206ENST00000443443 MRFAP1Q9Y605 127 aa6.05□□□□□ -1.44
VPS50-206ENST00000443443 ESRRBO95718 433 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 FDXRP22570 491 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 NOMO3P69849 1222 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 NOMO2Q5JPE7 1267 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 SYDE2Q5VT97 1194 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 NLGN4YQ8NFZ3 816 aaPredicted RBP6.04□□□□□ -1.44
VPS50-206ENST00000443443 NUP133Q8WUM0 1156 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 HDAC10Q969S8 669 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 MTMR8Q96EF0 704 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 PNKPQ96T60 521 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 C11orf54Q9H0W9 315 aaPredicted RBP6.04□□□□□ -1.44
VPS50-206ENST00000443443 SYNPO2LQ9H987 977 aa6.04□□□□□ -1.44
VPS50-206ENST00000443443 HMGB1P1B2RPK0 211 aaPredicted RBP6.03□□□□□ -1.44
VPS50-206ENST00000443443 MPLP40238 635 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 CTXN1P60606 82 aa6.03□□□□□ -1.44
VPS50-206ENST00000443443 IRX6P78412 446 aaPredicted RBP6.03□□□□□ -1.44
VPS50-206ENST00000443443 ATP8B2P98198 1209 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms