RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 DERAQ9Y315 318 aa17.38■□□□□ 0.37
USP39-205ENST00000442708 PODXLO00592 558 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 FSCN2O14926 492 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 AKAP3O75969 853 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 FOSL2P15408 326 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 NR2F2P24468 414 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 CCNE1P24864 410 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 LRPAP1P30533 357 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 KRT17Q04695 432 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 UBE3AQ05086 875 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 MYBPC2Q14324 1141 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 PSMD6Q15008 389 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 EDRF1Q3B7T1 1238 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 ZC3H3Q8IXZ2 948 aaKnown RBP17.37■□□□□ 0.37
USP39-205ENST00000442708 OR5B17Q8NGF7 314 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 NELFBQ8WX92 580 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 DHTKD1Q96HY7 919 aaPredicted RBP17.37■□□□□ 0.37
USP39-205ENST00000442708 UROC1Q96N76 676 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 MED15Q96RN5 788 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 TSPAN18Q96SJ8 248 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 DUSP9Q99956 384 aaKnown RBP17.37■□□□□ 0.37
USP39-205ENST00000442708 LMAN2LQ9H0V9 348 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 CTNND2Q9UQB3 1225 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 C2CD2Q9Y426 696 aa17.37■□□□□ 0.37
USP39-205ENST00000442708 EYSQ5T1H1 3165 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 TMEM189-UBE2V1I3L0A0 370 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 PSMA7O14818 248 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 B3GAT3O94766 335 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 CYP3A5P20815 502 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 ADAM9Q13443 819 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 DPCR1Q3MIW9 517 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 CEP135Q66GS9 1140 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 TTI2Q6NXR4 508 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 DCLRE1AQ6PJP8 1040 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 VPS52Q8N1B4 723 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 CXorf38Q8TB03 319 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 AUTS2Q8WXX7 1259 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 ZNF516Q92618 1163 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 CCDC127Q96BQ5 260 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 DDX27Q96GQ7 796 aaKnown RBP17.36■□□□□ 0.37
USP39-205ENST00000442708 B3GALT6Q96L58 329 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 ZBP1Q9H171 429 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 TLR9Q9NR96 1032 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 DPP3Q9NY33 737 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 LMCD1Q9NZU5 365 aa17.36■□□□□ 0.37
USP39-205ENST00000442708 ANO9A1A5B4 782 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 CARNS1A5YM72 827 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 I3L4J1 428 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 TADA2AO75478 443 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 RPL9P32969 192 aaKnown RBP17.35■□□□□ 0.37
USP39-205ENST00000442708 BRCC3P46736 316 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 STX17P56962 302 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 DLG4P78352 724 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 TFAMQ00059 246 aaKnown RBP17.35■□□□□ 0.37
USP39-205ENST00000442708 STIM1Q13586 685 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 C1orf220Q5T0J3 134 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 CCDC183Q5T5S1 534 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 PLPP4Q5VZY2 271 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 C9orf57Q5W0N0 161 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 FUT10Q6P4F1 479 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 ADGRD2Q7Z7M1 963 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 C1orf127Q8N9H9 656 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 BEST2Q8NFU1 509 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 TCF25Q9BQ70 676 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 MTMR12Q9C0I1 747 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 PUF60Q9UHX1 559 aaKnown RBP17.35■□□□□ 0.37
USP39-205ENST00000442708 SIX4Q9UIU6 781 aa17.35■□□□□ 0.37
USP39-205ENST00000442708 HIDE1A8MVS5 230 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 SOD2P04179 222 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 DLATP10515 647 aaKnown RBP17.34■□□□□ 0.37
USP39-205ENST00000442708 NLRP12P59046 1061 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 LRRC63Q05C16 580 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 PTPROQ16827 1216 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 CAVIN1Q6NZI2 390 aaKnown RBP17.34■□□□□ 0.37
USP39-205ENST00000442708 TMC7Q7Z402 723 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 MICALL1Q8N3F8 863 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 PARD3BQ8TEW8 1205 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 BORCS6Q96GS4 357 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 CGRRF1Q99675 332 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 HERC2P3Q9BVR0 1158 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 INTS13Q9NVM9 706 aa17.34■□□□□ 0.37
USP39-205ENST00000442708 SF3B1O75533 1304 aaKnown RBP eCLIP17.33■□□□□ 0.363e-9■■■■■ 206.8
USP39-205ENST00000442708 LRRIQ3A6PVS8 624 aaPredicted RBP17.33■□□□□ 0.36
USP39-205ENST00000442708 PIRO00625 290 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 SPTLC1O15269 473 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 XPOTO43592 962 aaKnown RBP17.33■□□□□ 0.36
USP39-205ENST00000442708 CTSAP10619 480 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 RPL13P26373 211 aaKnown RBP17.33■□□□□ 0.36
USP39-205ENST00000442708 GTF2F1P35269 517 aaKnown RBP eCLIP17.33■□□□□ 0.36
USP39-205ENST00000442708 PPP1R2P41236 205 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 PAK1Q13153 545 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 CCDC85BQ15834 202 aaPredicted RBP17.33■□□□□ 0.36
USP39-205ENST00000442708 TIGD5Q53EQ6 642 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 TCEAL5Q5H9L2 206 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 NT5DC4Q86YG4 428 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 WDR49Q8IV35 697 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 FAM186BQ8IYM0 893 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 MLKLQ8NB16 471 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 TSG101Q99816 390 aa17.33■□□□□ 0.36
USP39-205ENST00000442708 ENTPD7Q9NQZ7 604 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms