RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 JADE1Q6IE81 842 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 TMEM184AQ6ZMB5 413 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 BEST2Q8NFU1 509 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 RABGGTAQ92696 567 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 C18orf25Q96B23 403 aaPredicted RBP16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 FAM212AQ96EL1 285 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 SAAL1Q96ER3 474 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 EMILIN2Q9BXX0 1053 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 UBE2ZQ9H832 354 aaPredicted RBP16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 SCN1AP35498 2009 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 COL6A3P12111 3177 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 ZNF233A6NK53 670 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 PRPF40AO75400 957 aaKnown RBP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 C1RP00736 705 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 SRGAP2BP0DMP2 458 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 KCNC3Q14003 757 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 MYBPC2Q14324 1141 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 COBLL1Q53SF7 1204 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 KIAA1841Q6NSI8 718 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 PDXDC1Q6P996 788 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 CD300LGQ6UXG3 332 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 TAS1R1Q7RTX1 841 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 RBM23Q86U06 439 aaKnown RBP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 SLC9A9Q8IVB4 645 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 GUF1Q8N442 669 aaKnown RBP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 XXYLT1Q8NBI6 393 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 KCTD10Q9H3F6 313 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 RXFP1Q9HBX9 757 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 CLDND1Q9NY35 253 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 RBAKQ9NYW8 714 aaPredicted RBP16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 PCDHA5Q9Y5H7 936 aa16.31■□□□□ 0.2
CSNK1E-210ENST00000442216 NFICP08651 508 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 GTF2F1P35269 517 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 MRPS5P82675 430 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 SPAG1Q07617 926 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 NFIL3Q16649 462 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 ZNF658Q5TYW1 1059 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 C3orf58Q8NDZ4 430 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 ZSWIM2Q8NEG5 633 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 HASPINQ8TF76 798 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 CACTINQ8WUQ7 758 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 TTPALQ9BTX7 342 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 IGFLR1Q9H665 355 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 FNIP2Q9P278 1114 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 TRAF3IP3Q9Y228 551 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 PLXNA3P51805 1871 aa16.3■□□□□ 0.2
CSNK1E-210ENST00000442216 GOLGA8IPA6NC78 632 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 GOLGA8JA6NMD2 632 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 SYN3O14994 580 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 PER2O15055 1255 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 CLIC2O15247 247 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 CALUO43852 315 aaPredicted RBP16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 CLASP2O75122 1294 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 FGFR3P22607 806 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 CA8P35219 290 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 LTBRP36941 435 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 SNRNP35Q16560 246 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 LEXMQ3ZCV2 418 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 AUTS2Q8WXX7 1259 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 PIK3R5Q8WYR1 880 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 KLHL5Q96PQ7 755 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 DMAC2Q9NW81 257 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 NUB1Q9Y5A7 615 aa16.29■□□□□ 0.2
CSNK1E-210ENST00000442216 REV3LO60673 3130 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 ANO9A1A5B4 782 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 PIRO00625 290 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 GLP2RO95838 553 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 ADH1AP07327 375 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 CNPP09543 421 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 AARSP49588 968 aaKnown RBP eCLIP16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 PUS10Q3MIT2 529 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 CBWD2Q8IUF1 395 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 EFCAB13Q8IY85 973 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 RIN2Q8WYP3 895 aaPredicted RBP16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 CASP10Q92851 521 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 SUSD3Q96L08 255 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 DPP3Q9NY33 737 aa16.28■□□□□ 0.2
CSNK1E-210ENST00000442216 C2CD2LO14523 706 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 LINC01565O15544 149 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 EXOC3O60645 756 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 TBX10O75333 385 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 HOXB8P17481 243 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 KCNA5P22460 613 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 MCM4P33991 863 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 PPP1R2P41236 205 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 BRCC3P46736 316 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 NDUFV1P49821 464 aa16.27■□□□□ 0.2
CSNK1E-210ENST00000442216 CYP2J2P51589 502 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms