RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 NKX3-2P78367 333 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ATP8B2P98198 1209 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 MAP3K12Q12852 859 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 RRAGBQ5VZM2 374 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ICE2Q659A1 982 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 GRAMD4Q6IC98 578 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 CD300LDQ6UXZ3 194 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TMTC1Q8IUR5 882 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ADGRG2Q8IZP9 1017 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 Q8N3U1 123 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 KBTBD7Q8WVZ9 684 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TNPO1Q92973 898 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TRIM43Q96BQ3 446 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 UHRF1Q96T88 793 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 SYT3Q9BQG1 590 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 SLC26A6Q9BXS9 759 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 SMURF2Q9HAU4 748 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 DLL4Q9NR61 685 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TLR9Q9NR96 1032 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 SRRDQ9UH36 339 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TRPS1Q9UHF7 1281 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 BTN3A1O00481 513 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 PODXLO00592 558 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 WNT10BO00744 389 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 IRAK2O43187 625 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 GPR32O75388 356 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TNFRSF6BO95407 300 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 GAAP10253 952 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 FPR1P21462 350 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 COPB2P35606 906 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 SLC13A2Q13183 592 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 NR1I3Q14994 352 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 CCDC93Q567U6 631 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 GJC2Q5T442 439 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 BEND5Q7L4P6 421 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 TBC1D1Q86TI0 1168 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 MICU3Q86XE3 530 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ESX1Q8N693 406 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 DCBLD1Q8N8Z6 715 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 OR6B3Q8NGW1 331 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 STYXQ8WUJ0 223 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 CYFIP2Q96F07 1278 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 DDX11Q96FC9 970 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 LRRC46Q96FV0 321 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 WDR92Q96MX6 357 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 DPH1Q9BZG8 443 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 BCO1Q9HAY6 547 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ALG13Q9NP73 1137 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 SERHLQ9NQF3 203 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 RASSF1Q9NS23 344 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 IGSF9Q9P2J2 1179 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 CCDC39Q9UFE4 941 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 ZFP69BQ9UJL9 534 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 AJAP1Q9UKB5 411 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 SLC5A6Q9Y289 635 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 FRMD4BQ9Y2L6 1034 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 MED16Q9Y2X0 877 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 RABGAP1Q9Y3P9 1069 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 CUX2O14529 1486 aa4.75□□□□□ -1.65
CDC42BPA-207ENST00000441725 MATN4O95460 622 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 IFIT1P09914 478 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 MYL4P12829 197 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 GUCY1A2P33402 732 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 AFMP43652 599 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 FOXO4P98177 505 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 CREMQ03060 361 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 MTM1Q13496 603 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 RAB3GAP1Q15042 981 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 MAN2A1Q16706 1144 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 PLEKHN1Q494U1 663 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 SLC51AQ86UW1 340 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 LILRA2Q8N149 483 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 OTUD6BQ8N6M0 293 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 STPG3Q8N7X2 389 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 OR7D4Q8NG98 312 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 SLC30A5Q8TAD4 765 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 STON2Q8WXE9 905 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 NKD2Q969F2 451 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 RILPL2Q969X0 211 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 YTHDC1Q96MU7 727 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 GDF15Q99988 308 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 FAM167BQ9BTA0 163 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 OSBPL6Q9BZF3 934 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 HDAC9Q9UKV0 1011 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 A6NCN8 305 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 HNRNPDLO14979 420 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 THAP12O43422 761 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 ABHD16AO95870 558 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 PHKA1P46020 1223 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 PTK2BQ14289 1009 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 RAB30Q15771 203 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 EMC10Q5UCC4 262 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 VPS53Q5VIR6 699 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 FAAH2Q6GMR7 532 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 CNKSR3Q6P9H4 555 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 FBXO38Q6PIJ6 1188 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 CATSPERGQ6ZRH7 1159 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 UNC13DQ70J99 1090 aa4.74□□□□□ -1.65
CDC42BPA-207ENST00000441725 OTOP2Q7RTS6 562 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms