RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 ANO3Q9BYT9 981 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 IRAK4Q9NWZ3 460 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 GREB1LQ9C091 1923 aaPredicted RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 NVLO15381 856 aaKnown RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 MED24O75448 989 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 DCTN3O75935 186 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 NR3C1P04150 777 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 YY1P25490 414 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 RFC5P40937 340 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 GIT2Q14161 759 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 CTTNQ14247 550 aaKnown RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 MUM1Q2TAK8 710 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 SPDYAQ5MJ70 313 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 C12orf50Q8NA57 414 aaPredicted RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 GMCL1P1Q8NEA9 526 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 DCAF4Q8WV16 495 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 KIAA1683Q9H0B3 1180 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 TAS2R14Q9NYV8 317 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 STOML1Q9UBI4 398 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 DNM3Q9UQ16 869 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 LRCH1Q9Y2L9 728 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 ECEL1O95672 775 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 T-ENOLP0DO92 83 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 RPA1P27694 616 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 MARCKSL1P49006 195 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 CASP4P49662 377 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 CUL3Q13618 768 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 TBC1D25Q3MII6 688 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SYDE2Q5VT97 1194 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 RHBDF2Q6PJF5 856 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 TTC8Q8TAM2 541 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 MORC4Q8TE76 937 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 EZH1Q92800 747 aaPredicted RBP12.66□□□□□ -0.38
LTBR-203ENST00000441074 DENND2DQ9H6A0 471 aaPredicted RBP12.66□□□□□ -0.38
LTBR-203ENST00000441074 TLE6Q9H808 572 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 NMRK2Q9NPI5 230 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 PTPN22Q9Y2R2 807 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 TMX2Q9Y320 296 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SIGLEC16A6NMB1 481 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 TP73O15350 636 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 ITIH2P19823 946 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 EPHB2P29323 1055 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 VHLP40337 213 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 DYNC1I2Q13409 638 aaKnown RBP12.66□□□□□ -0.38
LTBR-203ENST00000441074 MOGSQ13724 837 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SIX1Q15475 284 aaPredicted RBP12.66□□□□□ -0.38
LTBR-203ENST00000441074 RNF220Q5VTB9 566 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SLC13A5Q86YT5 568 aaPredicted RBP12.66□□□□□ -0.38
LTBR-203ENST00000441074 CYP4X1Q8N118 509 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 SLCO2A1Q92959 643 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 BORCS6Q96GS4 357 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 WNT8AQ9H1J5 351 aa12.66□□□□□ -0.38
LTBR-203ENST00000441074 H0Y3Z8 333 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 MEIS2O14770 477 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 MYBL1P10243 752 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 PYGMP11217 842 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 KCNJ1P48048 391 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 NFIL3Q16649 462 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 Q4G0T1 1027 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 FAM47EQ6ZV65 393 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 ARHGAP22Q7Z5H3 698 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.38
LTBR-203ENST00000441074 ANKRD35Q8N283 1001 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 ETNPPLQ8TBG4 499 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 LRRC8CQ8TDW0 803 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 EPAS1Q99814 870 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 REEP2Q9BRK0 252 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 GPR88Q9GZN0 384 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 LRRC19Q9H756 370 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 NAALADL1Q9UQQ1 740 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 ASTN1O14525 1302 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 FRMPD4Q14CM0 1322 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 CENPFP49454 3210 aa12.65□□□□□ -0.38
LTBR-203ENST00000441074 TCRBV7S2A1N4TA0A589 114 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 CDH16O75309 829 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.39
LTBR-203ENST00000441074 ENTPD5O75356 428 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 SKIP12755 728 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 GAP43P17677 238 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 PTPN4P29074 926 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 EPHX2P34913 555 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 CHKAP35790 457 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 STAT2P52630 851 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 UBXN2AP68543 259 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 OCRLQ01968 901 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 SPIRE1Q08AE8 756 aa12.65□□□□□ -0.39
LTBR-203ENST00000441074 FKBP1CQ5VVH2 108 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms