RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 UBXN11Q5T124 520 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 CCDC94Q9BW85 323 aaPredicted RBP20.54■□□□□ 0.88
SNX17-203ENST00000440760 CYP26A1O43174 497 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 CALCAP01258 141 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 GCNT1Q02742 428 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 FAM71AQ8IYT1 594 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 C1orf127Q8N9H9 656 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 LNX1Q8TBB1 728 aaPredicted RBP20.54■□□□□ 0.88
SNX17-203ENST00000440760 WDR24Q96S15 920 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 TSEN34Q9BSV6 310 aaKnown RBP20.54■□□□□ 0.88
SNX17-203ENST00000440760 TRPV6Q9H1D0 765 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 STARD7Q9NQZ5 370 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 SIX4Q9UIU6 781 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 GUCA1BQ9UMX6 200 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 BZW2Q9Y6E2 419 aaKnown RBP20.54■□□□□ 0.88
SNX17-203ENST00000440760 DUSP10Q9Y6W6 482 aa20.54■□□□□ 0.88
SNX17-203ENST00000440760 PDCD11Q14690 1871 aaKnown RBP20.53■□□□□ 0.88
SNX17-203ENST00000440760 RPS6KA5O75582 802 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 RECQL4O94761 1208 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 KRT19P08727 400 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 AKAP5P24588 427 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 AXLP30530 894 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 GNG11P61952 73 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 NFX1Q12986 1120 aaKnown RBP20.53■□□□□ 0.88
SNX17-203ENST00000440760 KYAT1Q16773 422 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 CCDC122Q5T0U0 273 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 PACSIN1Q9BY11 444 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 DNAI1Q9UI46 699 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 ST3GAL5Q9UNP4 418 aa20.53■□□□□ 0.88
SNX17-203ENST00000440760 DDX3XO00571 662 aaKnown RBP eCLIP20.52■□□□□ 0.881e-10■■■□□ 17.5
SNX17-203ENST00000440760 SGPL1O95470 568 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 ASS1P00966 412 aaKnown RBP20.52■□□□□ 0.88
SNX17-203ENST00000440760 ITGB3P05106 788 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 KRT5P13647 590 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 ETF1P62495 437 aaKnown RBP20.52■□□□□ 0.88
SNX17-203ENST00000440760 TRPC3Q13507 836 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 CUL2Q13617 745 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 TMEM132DQ14C87 1099 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 GLRA4Q5JXX5 417 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 SLC47A2Q86VL8 602 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 GLYCTKQ8IVS8 523 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 ZNF710Q8N1W2 664 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 SNX27Q96L92 541 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 SYT11Q9BT88 431 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 IMPG2Q9BZV3 1241 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 RNF39Q9H2S5 420 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 ASB7Q9H672 318 aa20.52■□□□□ 0.88
SNX17-203ENST00000440760 AGO3Q9H9G7 860 aaKnown RBP20.52■□□□□ 0.88
SNX17-203ENST00000440760 KBTBD13C9JR72 458 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 GHRP10912 638 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 MAGEA1P43355 309 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 PTK7Q13308 1070 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 TRIM71Q2Q1W2 868 aaKnown RBP20.52■□□□□ 0.87
SNX17-203ENST00000440760 TWF2Q6IBS0 349 aaKnown RBP20.52■□□□□ 0.87
SNX17-203ENST00000440760 SCARA5Q6ZMJ2 495 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 APBB1IPQ7Z5R6 666 aaPredicted RBP20.52■□□□□ 0.87
SNX17-203ENST00000440760 RPAINQ86UA6 219 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 PALB2Q86YC2 1186 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 ARRDC4Q8NCT1 418 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 KIF12Q96FN5 646 aa20.52■□□□□ 0.87
SNX17-203ENST00000440760 ZNF699Q32M78 642 aa20.51■□□□□ 0.87
SNX17-203ENST00000440760 TAF3Q5VWG9 929 aa20.51■□□□□ 0.87
SNX17-203ENST00000440760 EPS8L1Q8TE68 723 aa20.51■□□□□ 0.87
SNX17-203ENST00000440760 ZMAT2Q96NC0 199 aaKnown RBP20.51■□□□□ 0.87
SNX17-203ENST00000440760 XYLT2Q9H1B5 865 aa20.51■□□□□ 0.87
SNX17-203ENST00000440760 PAK6Q9NQU5 681 aaPredicted RBP20.51■□□□□ 0.87
SNX17-203ENST00000440760 SEPT11Q9NVA2 429 aaKnown RBP20.51■□□□□ 0.87
SNX17-203ENST00000440760 KLK14Q9P0G3 267 aa20.51■□□□□ 0.87
SNX17-203ENST00000440760 PHF24Q9UPV7 400 aa20.51■□□□□ 0.87
SNX17-203ENST00000440760 R3HCC1Q9Y3T6 440 aaKnown RBP20.51■□□□□ 0.87
SNX17-203ENST00000440760 IPPQ9Y573 584 aa20.51■□□□□ 0.87
SNX17-203ENST00000440760 CD52P31358 61 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 NOP9Q86U38 636 aaKnown RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 SMG8Q8ND04 991 aaKnown RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 CXorf38Q8TB03 319 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 U2AF1L4Q8WU68 220 aaKnown RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 NAGPAQ9UK23 515 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 A0A0U1RQG5 324 aaPredicted RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 MACROD2A1Z1Q3 448 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 KIF2AO00139 706 aaPredicted RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 CCDC172P0C7W6 258 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 CCL5P13501 91 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 POLR2BP30876 1174 aaKnown RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 YARSP54577 528 aaKnown RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 PTPN11Q06124 597 aaPredicted RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 ZNF618Q5T7W0 954 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 ENOSF1Q7L5Y1 443 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 RNF208Q9H0X6 261 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 NOCTQ9UK39 431 aaKnown RBP20.5■□□□□ 0.87
SNX17-203ENST00000440760 NENFQ9UMX5 172 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 POLIQ9UNA4 740 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
SNX17-203ENST00000440760 TMCO5BA8MYB1 307 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 KIF5CO60282 957 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 ACO1P21399 889 aaKnown RBP20.49■□□□□ 0.87
SNX17-203ENST00000440760 POU5F1Q01860 360 aaKnown RBP20.49■□□□□ 0.87
SNX17-203ENST00000440760 KIF5AQ12840 1032 aa20.49■□□□□ 0.87
SNX17-203ENST00000440760 BMS1Q14692 1282 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms