RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 RPF1Q9H9Y2 349 aaKnown RBP21.67■■□□□ 1.06
FMR1-208ENST00000440235 ABCF3Q9NUQ8 709 aa21.67■■□□□ 1.06
FMR1-208ENST00000440235 AGO2Q9UKV8 859 aaKnown RBP21.67■■□□□ 1.06
FMR1-208ENST00000440235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.67■■□□□ 1.06
FMR1-208ENST00000440235 ATP9BO43861 1147 aa21.67■■□□□ 1.06
FMR1-208ENST00000440235 TMEM253P0C7T8 217 aa21.67■■□□□ 1.06
FMR1-208ENST00000440235 KCNA1Q09470 495 aa21.67■■□□□ 1.06
FMR1-208ENST00000440235 ORC1Q13415 861 aa21.67■■□□□ 1.06
FMR1-208ENST00000440235 DRP2Q13474 957 aa21.67■■□□□ 1.06
FMR1-208ENST00000440235 VCPKMTQ9H867 229 aa21.67■■□□□ 1.06
FMR1-208ENST00000440235 SUCLA2Q9P2R7 463 aaPredicted RBP21.67■■□□□ 1.06
FMR1-208ENST00000440235 NUMBP49757 651 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 NLRP11P59045 1033 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 SBK1Q52WX2 424 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 SLC30A9Q6PML9 568 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 EP400NLQ6ZTU2 488 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 ARID3BQ8IVW6 561 aaPredicted RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 KRT4P19013 534 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 COPS2P61201 443 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 NFIAQ12857 509 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 ZNF568Q3ZCX4 644 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 RWDD4Q6NW29 188 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 CDC42EP4Q9H3Q1 356 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 PCMTD2Q9NV79 361 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 CSDE1O75534 798 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 DGKIO75912 1065 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 ATP6V1B1P15313 513 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 YWHABP31946 246 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 ZNF844Q08AG5 666 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 PRPSAP1Q14558 356 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 CBWD2Q8IUF1 395 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 CALR3Q96L12 384 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 TMEM237Q96Q45 408 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 TUBB6Q9BUF5 446 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 TRPV6Q9H1D0 765 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 POLR3FQ9H1D9 316 aaPredicted RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 RNF146Q9NTX7 359 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 PITPNM2Q9BZ72 1349 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 NVLO15381 856 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 ATXN8OSP0DMR3 200 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 STX1BP61266 288 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 PRAMEP78395 509 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 SNRNP48Q6IEG0 339 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 GALNT4Q8N4A0 578 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 NKX2-3Q8TAU0 364 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 PRPF31Q8WWY3 499 aaKnown RBP21.66■■□□□ 1.06
FMR1-208ENST00000440235 CARD9Q9H257 536 aa21.66■■□□□ 1.06
FMR1-208ENST00000440235 TRIP10Q15642 601 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 TMTC4Q5T4D3 741 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 TRIM67Q6ZTA4 783 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 FBXO33Q7Z6M2 555 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 PFASO15067 1338 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 CST8O60676 142 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 TTC4O95801 387 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 CALCAP01258 141 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 KLHL38Q2WGJ6 581 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 SLC5A5Q92911 643 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 GNGT2O14610 69 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 CAV1Q03135 178 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 THOC5Q13769 683 aaKnown RBP21.65■■□□□ 1.06
FMR1-208ENST00000440235 MTBPQ96DY7 904 aa21.65■■□□□ 1.06
FMR1-208ENST00000440235 ITIH2P19823 946 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 RPA1P27694 616 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 CYP4A22Q5TCH4 519 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 FAM160B1Q5W0V3 765 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 ZSWIM2Q8NEG5 633 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 GABPB2Q8TAK5 448 aaPredicted RBP21.64■■□□□ 1.06
FMR1-208ENST00000440235 TTC25Q96NG3 672 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 AGPAT3Q9NRZ7 376 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 SEL1LQ9UBV2 794 aa21.64■■□□□ 1.06
FMR1-208ENST00000440235 RNF103-CHMP3A0A140T963 221 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 MEI1Q5TIA1 1274 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 ATP8B4Q8TF62 1192 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 WARS2Q9UGM6 360 aaKnown RBP21.64■■□□□ 1.05
FMR1-208ENST00000440235 PRR12Q9ULL5 1215 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 REXO2Q9Y3B8 237 aaKnown RBP21.64■■□□□ 1.05
FMR1-208ENST00000440235 KCNN4O15554 427 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 MED7O43513 233 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 KRT3P12035 628 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 NQO1P15559 274 aaKnown RBP21.64■■□□□ 1.05
FMR1-208ENST00000440235 AP2B1P63010 937 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 NFX1Q12986 1120 aaKnown RBP21.64■■□□□ 1.05
FMR1-208ENST00000440235 RCN1Q15293 331 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 MAPK6Q16659 721 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 RSBN1LQ6PCB5 846 aaPredicted RBP21.64■■□□□ 1.05
FMR1-208ENST00000440235 PDZD4Q76G19 769 aaPredicted RBP21.64■■□□□ 1.05
FMR1-208ENST00000440235 AENQ8WTP8 325 aaKnown RBP21.64■■□□□ 1.05
FMR1-208ENST00000440235 SNX25Q9H3E2 840 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 LZTS1Q9Y250 596 aa21.64■■□□□ 1.05
FMR1-208ENST00000440235 PALM3A6NDB9 673 aaPredicted RBP21.63■■□□□ 1.05
FMR1-208ENST00000440235 ASNSP08243 561 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 NR1H3Q13133 447 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 MROH9Q5TGP6 573 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 PRAMEF18Q5VWM3 479 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 RSPH3Q86UC2 560 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 FAM111AQ96PZ2 611 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 IL17RBQ9NRM6 502 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 TOPORSQ9NS56 1045 aaPredicted RBP21.63■■□□□ 1.05
FMR1-208ENST00000440235 KRT82Q9NSB4 513 aa21.63■■□□□ 1.05
FMR1-208ENST00000440235 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms