RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 BTBD6Q96KE9 485 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 PAFAH1B1P43034 410 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 SP3Q02447 781 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 CUL2Q13617 745 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 TSHZ1Q6ZSZ6 1077 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 NOA1Q8NC60 698 aaKnown RBP16.16■□□□□ 0.18
CPSF7-205ENST00000439958 CD99L2Q8TCZ2 262 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 NRCAMQ92823 1304 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
CPSF7-205ENST00000439958 C17orf102A2RUQ5 167 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 GTF2H1P32780 548 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 CDH8P55286 799 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 MCL1Q07820 350 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 RPS6KA1Q15418 735 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 RAET1EQ8TD07 263 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 SHC3Q92529 594 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 EMID1Q96A84 441 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-205ENST00000439958 ACAP3Q96P50 834 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 PDZD7Q9H5P4 517 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 SNTG2Q9NY99 539 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 POLIQ9UNA4 740 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 PPME1Q9Y570 386 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 CEP104O60308 925 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 TOMM70O94826 608 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 LCA5LO95447 670 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 F2P00734 622 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 PIGRP01833 764 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 GNA15P30679 374 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 TWF2Q6IBS0 349 aaKnown RBP16.15■□□□□ 0.18
CPSF7-205ENST00000439958 LLGL2Q6P1M3 1020 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 FMNL3Q8IVF7 1028 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 CPSF3Q9UKF6 684 aaKnown RBP16.15■□□□□ 0.18
CPSF7-205ENST00000439958 STYXL1Q9Y6J8 313 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 CNTNAP2Q9UHC6 1331 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 GRID2IPA4D2P6 1211 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 IFI16Q16666 785 aaKnown RBP16.15■□□□□ 0.18
CPSF7-205ENST00000439958 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 RBBP8NLQ8NC74 664 aaPredicted RBP16.15■□□□□ 0.18
CPSF7-205ENST00000439958 TRPV1Q8NER1 839 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 OSBPL9Q96SU4 736 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 XPNPEP3Q9NQH7 507 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 TNFSF13BQ9Y275 285 aa16.15■□□□□ 0.18
CPSF7-205ENST00000439958 FBXO38Q6PIJ6 1188 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 EIF2AQ9BY44 585 aaKnown RBP16.14■□□□□ 0.17
CPSF7-205ENST00000439958 RNF186Q9NXI6 227 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 SNX12Q9UMY4 172 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 AGAP1Q9UPQ3 857 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 ARID2Q68CP9 1835 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 TSPAN1O60635 241 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-205ENST00000439958 POLR2BP30876 1174 aaKnown RBP16.14■□□□□ 0.17
CPSF7-205ENST00000439958 HIC1Q14526 733 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 WDR49Q8IV35 697 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 GDAP1L1Q96MZ0 367 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 C11orf70Q9BRQ4 267 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 CCDC94Q9BW85 323 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-205ENST00000439958 M0QZ92 97 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 HOXC6P09630 235 aa16.14■□□□□ 0.17
CPSF7-205ENST00000439958 SPDYE4A6NLX3 237 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 CLTAP09496 248 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 AMHR2Q16671 573 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
CPSF7-205ENST00000439958 COQ4Q9Y3A0 265 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 BUB1BO60566 1050 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-205ENST00000439958 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
CPSF7-205ENST00000439958 NSFP46459 744 aaKnown RBP16.13■□□□□ 0.17
CPSF7-205ENST00000439958 HSP90AA2PQ14568 343 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-205ENST00000439958 TMEM132DQ14C87 1099 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 NBPF20Q3BBV1 942 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 ZNF667Q5HYK9 610 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 RNF10Q8N5U6 811 aaKnown RBP16.13■□□□□ 0.17
CPSF7-205ENST00000439958 TMEM40Q8WWA1 233 aa16.13■□□□□ 0.17
CPSF7-205ENST00000439958 NXF3Q9H4D5 531 aaKnown RBP16.13■□□□□ 0.17
CPSF7-205ENST00000439958 PDE2AO00408 941 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 SPOPO43791 374 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 CFHP08603 1231 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 EIF4BP23588 611 aaKnown RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 YARSP54577 528 aaKnown RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 CACNB2Q08289 660 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 C10orf76Q5T2E6 689 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 CYFIP2Q96F07 1278 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 TLR10Q9BXR5 811 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 ARGLU1Q9NWB6 273 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 PJA2O43164 708 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 ALDH1A1P00352 501 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 CAP1Q01518 475 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 FMO1Q01740 532 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 ZNF211Q13398 564 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 SEC31AO94979 1220 aaKnown RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 TM4SF4P48230 202 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 GCNT1Q02742 428 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 CKAP4Q07065 602 aaKnown RBP16.12■□□□□ 0.17
CPSF7-205ENST00000439958 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 KATNAL1Q9BW62 490 aa16.12■□□□□ 0.17
CPSF7-205ENST00000439958 CXCL16Q9H2A7 254 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms