RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 USP11P51784 963 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 ANO5Q75V66 913 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 SKAP1Q86WV1 359 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 SYNPOQ8N3V7 929 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 CSGALNACT1Q8TDX6 532 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 CCDC12Q8WUD4 166 aaPredicted RBP12.39□□□□□ -0.43
CSTF3-203ENST00000438862 ZC3H10Q96K80 434 aaKnown RBP12.39□□□□□ -0.43
CSTF3-203ENST00000438862 ASB16Q96NS5 453 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
CSTF3-203ENST00000438862 SDK1Q7Z5N4 2213 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 TSPAN1O60635 241 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 DKC1O60832 514 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSTF3-203ENST00000438862 PSMD10O75832 226 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 AKAP3O75969 853 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 LRG1P02750 347 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 CSRP1P21291 193 aaKnown RBP12.38□□□□□ -0.43
CSTF3-203ENST00000438862 GNA11P29992 359 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 MPLP40238 635 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 PSMC5P62195 406 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 TUSC3Q13454 348 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 PRSS36Q5K4E3 855 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 SH3PXD2AQ5TCZ1 1133 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 VITQ6UXI7 678 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 KBTBD6Q86V97 674 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 MFSD6LQ8IWD5 586 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 RNF149Q8NC42 400 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 RABGGTAQ92696 567 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 SMARCD2Q92925 531 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
CSTF3-203ENST00000438862 PDCD11Q14690 1871 aaKnown RBP12.38□□□□□ -0.43
CSTF3-203ENST00000438862 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 C4orf47A7E2U8 309 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 RNF40O75150 1001 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 CDC45O75419 566 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 AKAP5P24588 427 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 RFC5P40937 340 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
CSTF3-203ENST00000438862 POU5F1BQ06416 359 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 RTN1Q16799 776 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 PFKFB3Q16875 520 aaPredicted RBP12.37□□□□□ -0.43
CSTF3-203ENST00000438862 APOA5Q6Q788 366 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 B3GNT9Q6UX72 402 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.37□□□□□ -0.43
CSTF3-203ENST00000438862 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 TMEM143Q96AN5 459 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 CPB2Q96IY4 423 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 PAAF1Q9BRP4 392 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 EDEM2Q9BV94 578 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 NXF3Q9H4D5 531 aaKnown RBP12.37□□□□□ -0.43
CSTF3-203ENST00000438862 DHX33Q9H6R0 707 aaKnown RBP12.37□□□□□ -0.43
CSTF3-203ENST00000438862 TRPV4Q9HBA0 871 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 RBM12Q9NTZ6 932 aaKnown RBP12.37□□□□□ -0.43
CSTF3-203ENST00000438862 ANKFY1Q9P2R3 1169 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 MTRRQ9UBK8 725 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 NEUROG3Q9Y4Z2 214 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 RBM8AQ9Y5S9 174 aaKnown RBP12.37□□□□□ -0.43
CSTF3-203ENST00000438862 DMXL2Q8TDJ6 3036 aa12.37□□□□□ -0.43
CSTF3-203ENST00000438862 WDR27A2RRH5 827 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 ARNTLO00327 626 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 SGSM2O43147 1006 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
CSTF3-203ENST00000438862 TOP3BO95985 862 aaKnown RBP12.36□□□□□ -0.43
CSTF3-203ENST00000438862 CHMLP26374 656 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 ELF1P32519 619 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 KPNA1P52294 538 aaPredicted RBP12.36□□□□□ -0.43
CSTF3-203ENST00000438862 PTENP60484 403 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 SOWAHCQ53LP3 525 aaPredicted RBP12.36□□□□□ -0.43
CSTF3-203ENST00000438862 CYP4A22Q5TCH4 519 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 PLA2G4FQ68DD2 849 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 RALGPS2Q86X27 583 aaPredicted RBP12.36□□□□□ -0.43
CSTF3-203ENST00000438862 ZNF461Q8TAF7 563 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 CEP170P1Q96L14 293 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 CORO1BQ9BR76 489 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 SMOC1Q9H4F8 434 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
CSTF3-203ENST00000438862 PARP2Q9UGN5 583 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 CDY1Q9Y6F8 540 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 ADAMTS20P59510 1910 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 LAMA1P25391 3075 aa12.36□□□□□ -0.43
CSTF3-203ENST00000438862 MYBPHLA2RUH7 354 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 NRG2O14511 850 aaPredicted RBP12.35□□□□□ -0.43
CSTF3-203ENST00000438862 CHADO15335 359 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 ZBTB43O43298 467 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 KIF4AO95239 1232 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 FGFR3P22607 806 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 NPEPPSP55786 919 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 MXD4Q14582 209 aaPredicted RBP12.35□□□□□ -0.43
CSTF3-203ENST00000438862 Q4G0T1 1027 aa12.35□□□□□ -0.43
CSTF3-203ENST00000438862 SWT1Q5T5J6 900 aaKnown RBP12.35□□□□□ -0.43
CSTF3-203ENST00000438862 SLC27A1Q6PCB7 646 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms