RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TMEM74BQ9NUR3 256 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 TMEM140Q9NV12 185 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 DDX56Q9NY93 547 aaKnown RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 TUBD1Q9UJT1 453 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 AJAP1Q9UKB5 411 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 ZBTB21Q9ULJ3 1066 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 ATP11BQ9Y2G3 1177 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 USP15Q9Y4E8 981 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PCDHGA9Q9Y5G4 932 aaKnown RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PCDHGA8Q9Y5G5 932 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PCDHGA7Q9Y5G6 932 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PCDHGA6Q9Y5G7 932 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PCDHGA3Q9Y5H0 932 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 ACTL7AQ9Y615 435 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 FPGT-TNNI3KV9GXZ4 949 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 WASHC2CQ9Y4E1 1318 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 TEX14Q8IWB6 1497 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 TEX33O43247 280 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 B3GALT2O43825 422 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 SPATA31D3P0C874 917 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 EGR2P11161 476 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 ATP5JP18859 108 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 TGM1P22735 817 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 ADRA1BP35368 520 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 INHBEP58166 350 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 SCAPQ12770 1279 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 MTMR1Q13613 665 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 DACT2Q5SW24 774 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 B3GNTL1Q67FW5 361 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 PGM2L1Q6PCE3 622 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 Q6YL49 198 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 SPATA31D4Q6ZUB0 917 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 TMEM132CQ8N3T6 1108 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 STAG1Q8WVM7 1258 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 NRG4Q8WWG1 115 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 LINC00476Q8WZB0 136 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 PRG4Q92954 1404 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 COQ10AQ96MF6 247 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 LDAHQ9H6V9 325 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 MANSC1Q9H8J5 431 aa4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 ARID4BQ4LE39 1312 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P12-201ENST00000438745 KLHL33A6NCF5 533 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 ALG1L2C9J202 215 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 GABRDO14764 452 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 NDUFS2O75306 463 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 PRSS23O95084 383 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 HLA-DOAP06340 250 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 PDGFRBP09619 1106 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 RAP2AP10114 183 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 IARSP41252 1262 aaKnown RBP4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 ABHD17BQ5VST6 288 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 TSHZ3Q63HK5 1081 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 AMOTL1Q8IY63 956 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 CPEB3Q8NE35 698 aaKnown RBP4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 OR56A1Q8NGH5 318 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 GPR150Q8NGU9 434 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 CCHCR1Q8TD31 782 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 DPF2Q92785 391 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 FUBP3Q96I24 572 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 BOD1Q96IK1 185 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 C7orf25Q9BPX7 421 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 WDR11Q9BZH6 1224 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 FBXO34Q9NWN3 711 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 ANKFY1Q9P2R3 1169 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 TRHDEQ9UKU6 1024 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 INTUQ9ULD6 942 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 DNM3Q9UQ16 869 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 IPPQ9Y573 584 aa4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 EPN1Q9Y6I3 576 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 MYBBP1AQ9BQG0 1328 aaKnown RBP4.41□□□□□ -1.7
HMGB3P12-201ENST00000438745 CCDC78A2IDD5 438 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 GPR32O75388 356 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 SPDEFO95238 335 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 CKBP12277 381 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 DDCP20711 480 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 C5AR1P21730 350 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 EDNRBP24530 442 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 DDX6P26196 483 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 CTXN1P60606 82 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 RAP2BP61225 183 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 GUCY1B3Q02153 619 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 RESTQ13127 1097 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZNF529Q6P280 563 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 MAPKAPK5Q8IW41 473 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 PPM1NQ8N819 430 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 ALG13Q9NP73 1137 aaKnown RBP4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 MKS1Q9NXB0 559 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 MAP3K2Q9Y2U5 619 aa4.4□□□□□ -1.71
HMGB3P12-201ENST00000438745 WDR97A6NE52 1622 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 A0A1B0GTW7 788 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 SHTN1A0MZ66 631 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 HTRA2O43464 458 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 SGTAO43765 313 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 MT-CO1P00395 513 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 LMNAP02545 664 aaKnown RBP4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 MYBL2P10244 700 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 SLC6A2P23975 617 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
HMGB3P12-201ENST00000438745 OCA2Q04671 838 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms