RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NXNQ6DKJ4 435 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 SNRNP48Q6IEG0 339 aaKnown RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 SLC30A10Q6XR72 485 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 NSMCE1Q8WV22 266 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 CYTH2Q99418 400 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 TSC22D3Q99576 134 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ANKEF1Q9NU02 776 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 DDTLA6NHG4 134 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 GOLGA8RI6L899 631 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 EML1O00423 815 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 SLITRK3O94933 977 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 TTC4O95801 387 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 FDX1P10109 184 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 POLE2P56282 527 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 RTKN2Q8IZC4 609 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 FUKQ8N0W3 1084 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 TATDN2Q93075 761 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 FAM149B1Q96BN6 582 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ALKBH8Q96BT7 664 aaKnown RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 NLRP4Q96MN2 994 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ALG13Q9NP73 1137 aaKnown RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 GEMIN8Q9NWZ8 242 aaKnown RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 TBX20Q9UMR3 447 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 CSADQ9Y600 493 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 GAKO14976 1311 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ABCC6O95255 1503 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 EIF4E1BA6NMX2 242 aaKnown RBP7.07□□□□□ -1.28
CSDE1-205ENST00000438362 CAPN9O14815 690 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 PYGMP11217 842 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ARL4AP40617 200 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 SPP2Q13103 211 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 STXBP2Q15833 593 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ECM1Q16610 540 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 DUOXA2Q1HG44 320 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 CBWD6Q4V339 395 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 CBWD3Q5JTY5 395 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 CBWD5Q5RIA9 395 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 EEPD1Q7L9B9 569 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 GMCL1P1Q8NEA9 526 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ACER1Q8TDN7 264 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 DEPDC1BQ8WUY9 529 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 OSBPL1AQ9BXW6 950 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 GPRC5CQ9NQ84 441 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ZNF302Q9NR11 478 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 CYP26B1Q9NR63 512 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 FBXO28Q9NVF7 368 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 SUFUQ9UMX1 484 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 HEY1Q9Y5J3 304 aa7.07□□□□□ -1.28
CSDE1-205ENST00000438362 ADAMTS3O15072 1205 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 PPFIA2O75334 1257 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ECM2O94769 699 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 NOL4O94818 638 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 KRT3P12035 628 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ECE1P42892 770 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 AP3M2P53677 418 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ASPHQ12797 758 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 XKR3Q5GH77 459 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 PPP6R3Q5H9R7 873 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 OTOP1Q7RTM1 612 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 SLC47A2Q86VL8 602 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 LONP2Q86WA8 852 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 CCDC125Q86Z20 511 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 TTLL6Q8N841 843 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 CCNYQ8ND76 341 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 FAM151AQ8WW52 585 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 SCYL1Q96KG9 808 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 AGBL1Q96MI9 1066 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 KIFC3Q9BVG8 833 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 JPH1Q9HDC5 661 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 SYNJ2BP-COX16A0A087WUM0 186 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 O00370 1275 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 WDR46O15213 610 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 RARAP10276 462 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 GYS1P13807 737 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 SAT1P21673 171 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 RRM1P23921 792 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 MARK3P27448 753 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 NFX1Q12986 1120 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 NCOA4Q13772 614 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 PIGHQ14442 188 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 HYIQ5T013 277 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 CIAPIN1Q6FI81 312 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 C15orf52Q6ZUT6 534 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 FEZF2Q8TBJ5 459 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 TAS1R2Q8TE23 839 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 PSPC1Q8WXF1 523 aaKnown RBP7.06□□□□□ -1.28
CSDE1-205ENST00000438362 KRT35Q92764 455 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 CENPTQ96BT3 561 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 HES6Q96HZ4 224 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 FAM161BQ96MY7 647 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 VCX3AQ9NNX9 186 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 UBN1Q9NPG3 1134 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 COX16Q9P0S2 106 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.06□□□□□ -1.283e-6■■■■□ 21.1
CSDE1-205ENST00000438362 ASTN1O14525 1302 aa7.06□□□□□ -1.28
CSDE1-205ENST00000438362 FRMPD4Q14CM0 1322 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms