RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ACVR2BQ13705 512 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 ZNF280DQ6N043 979 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 ULK4Q96C45 1275 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 TUT1Q9H6E5 874 aaKnown RBP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 MYMKA6NI61 221 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 ZC3H11AO75152 810 aaKnown RBP eCLIP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 CYP2C8P10632 490 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 PDGFRAP16234 1089 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 NPEPPSP55786 919 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 NOP14P78316 857 aaKnown RBP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 ZNF467Q7Z7K2 595 aaPredicted RBP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 TARS2Q9BW92 718 aaKnown RBP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 KPNA7A9QM74 516 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 EEF2KO00418 725 aaKnown RBP16.5■□□□□ 0.23
NEDD4-202ENST00000435532 ALDH2P05091 517 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 THP07101 528 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 SHMT1P34896 483 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 GRIK4Q16099 956 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 SYTL3Q4VX76 610 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 SLC7A14Q8TBB6 771 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
NEDD4-202ENST00000435532 SLC15A5A6NIM6 579 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 ALDH5A1P51649 535 aaPredicted RBP16.49■□□□□ 0.23
NEDD4-202ENST00000435532 RASSF3Q86WH2 238 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 RCOR2Q8IZ40 523 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 PDCD2LQ9BRP1 358 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 SARS2Q9NP81 518 aaKnown RBP16.49■□□□□ 0.23
NEDD4-202ENST00000435532 FIS1Q9Y3D6 152 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 GNGT1P63211 74 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 PIGHQ14442 188 aaPredicted RBP16.49■□□□□ 0.23
NEDD4-202ENST00000435532 NFRKBQ6P4R8 1299 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 VCX3AQ9NNX9 186 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 CTXN3Q4LDR2 81 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 FOPNLQ96NB1 174 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 SENP7Q9BQF6 1050 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 ARHGEF28Q8N1W1 1705 aaKnown RBP16.49■□□□□ 0.23
NEDD4-202ENST00000435532 ZNF197O14709 1029 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 AXLP30530 894 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 FSCN1Q16658 493 aaKnown RBP16.49■□□□□ 0.23
NEDD4-202ENST00000435532 PID1Q7Z2X4 250 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 UVRAGQ9P2Y5 699 aa16.49■□□□□ 0.23
NEDD4-202ENST00000435532 ITGB3P05106 788 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 CLCN3P51790 818 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 PGM5Q15124 567 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.23
NEDD4-202ENST00000435532 RASGRF2O14827 1237 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 PSEN2P49810 448 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 TROAPQ12815 778 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 CHSY1Q86X52 802 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 SPATS2Q86XZ4 545 aaKnown RBP16.48■□□□□ 0.23
NEDD4-202ENST00000435532 TMEM199Q8N511 208 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 EGFL8Q99944 293 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 KLK14Q9P0G3 267 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 B3GAT3O94766 335 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 PHEXP78562 749 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 KIZQ2M2Z5 673 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 TMC7Q7Z402 723 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 LMNTD2Q8IXW0 634 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 PPP1R12CQ9BZL4 782 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 FAM205CA6NFA0 338 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 TBKBP1A7MCY6 615 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 RALBP11234 206 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 PPARDQ03181 441 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 DPYDQ12882 1025 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 PTGISQ16647 500 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 MEI1Q5TIA1 1274 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 C3orf70A6NLC5 250 aaPredicted RBP16.48■□□□□ 0.23
NEDD4-202ENST00000435532 SUN1O94901 812 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 PTPRAP18433 802 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 ADCY2Q08462 1091 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 IMPG1Q17R60 797 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 RAPGEF5Q92565 580 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 KIAA1257Q9ULG3 409 aa16.48■□□□□ 0.23
NEDD4-202ENST00000435532 MYO1DO94832 1006 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 TM4SF1P30408 202 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 LHX1P48742 406 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 CDK5RAP1Q96SZ6 601 aaKnown RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 CNOT10Q9H9A5 744 aaKnown RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 VTNP04004 478 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 ZNF286BP0CG31 522 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 CCT5P48643 541 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 C6orf118Q5T5N4 469 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 TRAPPC11Q7Z392 1133 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 C4orf19Q8IY42 314 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 KRT35Q92764 455 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 RSRC1Q96IZ7 334 aaKnown RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 FAM49BQ9NUQ9 324 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 NFIBO00712 420 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 CHRNA3P32297 505 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 BTG3Q14201 252 aaPredicted RBP16.47■□□□□ 0.23
NEDD4-202ENST00000435532 ADSSL1Q8N142 457 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 OR6P1Q8NGX9 317 aa16.47■□□□□ 0.23
NEDD4-202ENST00000435532 TRPM5Q9NZQ8 1165 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms