RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TMEM94Q12767 1356 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 UMODL1Q5DID0 1318 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF862O60290 1169 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 PLS3P13797 630 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 MAP3K7CLP57077 242 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 DAB2IPQ5VWQ8 1189 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 SH3GLB2Q9NR46 395 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 ZNF180Q9UJW8 692 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 DIS3Q9Y2L1 958 aaKnown RBP7.9□□□□□ -1.15
CPSF6-202ENST00000435070 LTN1O94822 1766 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 PDE8AO60658 829 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 CTNNA2P26232 953 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 NR1H3Q13133 447 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 GSTA3Q16772 222 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 PAOXQ6QHF9 649 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 RGS9BPQ6ZS82 235 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 GSTA5Q7RTV2 222 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 SFR1Q86XK3 245 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 MAML1Q92585 1016 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 USP6NLQ92738 828 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 IQCGQ9H095 443 aaKnown RBP7.9□□□□□ -1.15
CPSF6-202ENST00000435070 DOLKQ9UPQ8 538 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 HEMK1Q9Y5R4 338 aaPredicted RBP7.9□□□□□ -1.15
CPSF6-202ENST00000435070 LMTK3Q96Q04 1460 aa7.9□□□□□ -1.15
CPSF6-202ENST00000435070 EEF2P13639 858 aaKnown RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PDK4Q16654 411 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 C6orf163Q5TEZ5 329 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 LRRC8BQ6P9F7 803 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 ARMCX6Q7L4S7 300 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 SPZ1Q9BXG8 430 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 KIAA1586Q9HCI6 787 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 KANSL3Q9P2N6 904 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 POTEFA5A3E0 1075 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 FOXN3O00409 490 aaPredicted RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 CYP26A1O43174 497 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 CIB2O75838 187 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 GCNT3O95395 438 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 GAS8O95995 478 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 POTEIP0CG38 1075 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 KRT4P19013 534 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 RRM1P23921 792 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 DLG1Q12959 904 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 GRAMD1BQ3KR37 738 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 MMEL1Q495T6 779 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 DPY19L2P1Q6NXN4 242 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 POTEGQ6S5H5 508 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 POTEEQ6S8J3 1075 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 CYFIP1Q7L576 1253 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 TRABD2AQ86V40 505 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PIP4K2CQ8TBX8 421 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 RBM15Q96T37 977 aaKnown RBP eCLIP7.89□□□□□ -1.153e-8■■■□□ 18.7
CPSF6-202ENST00000435070 PCDHA12Q9UN75 941 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PKD1L3Q7Z443 1732 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 ARFGEF2Q9Y6D5 1785 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 RSPH10B2B2RC85 870 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 C2CD2LO14523 706 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 TP73O15350 636 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 DKC1O60832 514 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 RSPH10BP0C881 870 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 EPHB1P54762 984 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 KBTBD12Q3ZCT8 623 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 EFCAB3Q8N7B9 438 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 TGFBRAP1Q8WUH2 860 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PPP2R3CQ969Q6 453 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 SLC35C1Q96A29 364 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 GRIP2Q9C0E4 1043 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PFDN4Q9NQP4 134 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 LAMB4A4D0S4 1761 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 FRMPD2Q68DX3 1309 aaPredicted RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 MROH5Q6ZUA9 1318 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 GOLGA8SH3BPF8 625 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 GOLGA8MH3BSY2 632 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PDLIM1O00151 329 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 TRAFD1O14545 582 aaPredicted RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 HSPA6P17066 643 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 CYP2J2P51589 502 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 FASTKD3Q14CZ7 662 aaKnown RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 NCSTNQ92542 709 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 SNF8Q96H20 258 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 CATSPER2Q96P56 530 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 TRIM55Q9BYV6 548 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 SHCBP1LQ9BZQ2 653 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 LRRC27Q9C0I9 530 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 ANKFY1Q9P2R3 1169 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PPARGC1AQ9UBK2 798 aaKnown RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 MARCOQ9UEW3 520 aaPredicted RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 NR3C1P04150 777 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 IGBP1P78318 339 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 SFT2D3Q587I9 215 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 IZUMO3Q5VZ72 239 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 ALYREFQ86V81 257 aaKnown RBP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPSF6-202ENST00000435070 SLC26A7Q8TE54 656 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 TTC17Q96AE7 1141 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 ELMO3Q96BJ8 720 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 MTBPQ96DY7 904 aa7.89□□□□□ -1.15
CPSF6-202ENST00000435070 PLA2G12BQ9BX93 195 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms