RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 USP28Q96RU2 1077 aa17.2■□□□□ 0.34
NUP50-210ENST00000434760 KCNK12Q9HB15 430 aa17.2■□□□□ 0.34
NUP50-210ENST00000434760 TBX20Q9UMR3 447 aa17.2■□□□□ 0.34
NUP50-210ENST00000434760 CDY1Q9Y6F8 540 aa17.2■□□□□ 0.34
NUP50-210ENST00000434760 COL4A2P08572 1712 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 CFAP54Q96N23 3096 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 HNRNPDLO14979 420 aaKnown RBP17.19■□□□□ 0.34
NUP50-210ENST00000434760 CLDN3O15551 220 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 TBC1D4O60343 1298 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 FAM13AO94988 1023 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 HNRNPA1P09651 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
NUP50-210ENST00000434760 SCP2P22307 547 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 OR1D2P34982 312 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 ROR1Q01973 937 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 VARS2Q5ST30 1063 aaKnown RBP17.19■□□□□ 0.34
NUP50-210ENST00000434760 LIN9Q5TKA1 542 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 CWF19L1Q69YN2 538 aaKnown RBP17.19■□□□□ 0.34
NUP50-210ENST00000434760 SLC8B1Q6J4K2 584 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 GET4Q7L5D6 327 aaPredicted RBP17.19■□□□□ 0.34
NUP50-210ENST00000434760 SLC7A14Q8TBB6 771 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 SUSD3Q96L08 255 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 STK17AQ9UEE5 414 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
NUP50-210ENST00000434760 COL4A3Q01955 1670 aa17.19■□□□□ 0.34
NUP50-210ENST00000434760 A0A087X0B3 334 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 SYN3O14994 580 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 TRAPPC3O43617 180 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 TRAK2O60296 914 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 TBCAO75347 108 aaKnown RBP17.18■□□□□ 0.34
NUP50-210ENST00000434760 PPP1R37O75864 691 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 ADRB2P07550 413 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 CLTAP09496 248 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 GBP2P32456 591 aaPredicted RBP17.18■□□□□ 0.34
NUP50-210ENST00000434760 RPL9P32969 192 aaKnown RBP17.18■□□□□ 0.34
NUP50-210ENST00000434760 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
NUP50-210ENST00000434760 LIG4P49917 911 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 NTHL1P78549 312 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 GTF2BQ00403 316 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 TCF15Q12870 199 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 TDGQ13569 410 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 HTR4Q13639 388 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 MRPL58Q14197 206 aaKnown RBP17.18■□□□□ 0.34
NUP50-210ENST00000434760 ZBTB6Q15916 424 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 ENOX2Q16206 610 aaKnown RBP17.18■□□□□ 0.34
NUP50-210ENST00000434760 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 RASSF8Q8NHQ8 419 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 RSAD2Q8WXG1 361 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 BICD1Q96G01 975 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 ST6GALNAC4Q9H4F1 302 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 IGSF9Q9P2J2 1179 aa17.18■□□□□ 0.34
NUP50-210ENST00000434760 A0A0B4J269 797 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 WDR27A2RRH5 827 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 TISP43B9A030 160 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 ANHXE9PGG2 379 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 OGTO15294 1046 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 CCL16O15467 120 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 NARSO43776 548 aaKnown RBP17.17■□□□□ 0.34
NUP50-210ENST00000434760 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
NUP50-210ENST00000434760 AVPR2P30518 371 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 LRPAP1P30533 357 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 SPAG1Q07617 926 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 PPM1LQ5SGD2 360 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 AXDND1Q5T1B0 1012 aaPredicted RBP17.17■□□□□ 0.34
NUP50-210ENST00000434760 GRASPQ7Z6J2 395 aaPredicted RBP17.17■□□□□ 0.34
NUP50-210ENST00000434760 TMEM105Q8N8V8 129 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 PLEKHA5Q9HAU0 1116 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 PIDD1Q9HB75 910 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 MIA3Q5JRA6 1907 aa17.17■□□□□ 0.34
NUP50-210ENST00000434760 STX6O43752 255 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 LAMP2P13473 410 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 DDIT3P35638 169 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 NASPP49321 788 aaPredicted RBP17.16■□□□□ 0.34
NUP50-210ENST00000434760 PPP2R3AQ06190 1150 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 SFR1Q86XK3 245 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 DNAJC19Q96DA6 116 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 STRA6Q9BX79 667 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 IKZF4Q9H2S9 585 aa17.16■□□□□ 0.34
NUP50-210ENST00000434760 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.16■□□□□ 0.344e-8■■■■■ 51.6
NUP50-210ENST00000434760 CPSF3Q9UKF6 684 aaKnown RBP17.16■□□□□ 0.34
NUP50-210ENST00000434760 ARHGEF37A1IGU5 675 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 MYMKA6NI61 221 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 M0QZQ0 153 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 ABLIM3O94929 683 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 KRT18P05783 430 aaKnown RBP17.15■□□□□ 0.34
NUP50-210ENST00000434760 FSHRP23945 695 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 MCM4P33991 863 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.34
NUP50-210ENST00000434760 GUCY2FP51841 1108 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
NUP50-210ENST00000434760 SLC39A14Q15043 492 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 ZC2HC1CQ53FD0 456 aaPredicted RBP17.15■□□□□ 0.34
NUP50-210ENST00000434760 RTL10Q7L3V2 364 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 SNX21Q969T3 373 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 KIF12Q96FN5 646 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 HCFC1R1Q9NWW0 138 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 FBXL5Q9UKA1 691 aa17.15■□□□□ 0.34
NUP50-210ENST00000434760 UBQLN1Q9UMX0 589 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms