RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 EP400Q96L91 3159 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 FZD9O00144 591 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 CLDN3O15551 220 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 CAND2O75155 1236 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 GAS8O95995 478 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 SEC24CP53992 1094 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 SP4Q02446 784 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 GRM1Q13255 1194 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 SLC29A2Q14542 456 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 SH3D19Q5HYK7 790 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 FAM160B1Q5W0V3 765 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 TAOK1Q7L7X3 1001 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 PHF13Q86YI8 300 aaPredicted RBP11.12□□□□□ -0.63
CD44-210ENST00000434472 RHOT1Q8IXI2 618 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 SLC7A3Q8WY07 619 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
CD44-210ENST00000434472 RAPGEF5Q92565 580 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 CYFIP2Q96F07 1278 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 PI4K2AQ9BTU6 479 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 RBAKQ9NYW8 714 aaPredicted RBP11.12□□□□□ -0.63
CD44-210ENST00000434472 CHORDC1Q9UHD1 332 aaPredicted RBP11.12□□□□□ -0.63
CD44-210ENST00000434472 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 PCDHB4Q9Y5E5 795 aa11.12□□□□□ -0.63
CD44-210ENST00000434472 MROH7Q68CQ1 1323 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 RLFQ13129 1914 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 IGKV6D-21A0A0A0MT36 114 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 TCRBV7S2A1N4TA0A589 114 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 FAM170AA1A519 330 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 LRRIQ4A6NIV6 560 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
CD44-210ENST00000434472 RIPK2O43353 540 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 FSBPO95073 299 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 CLTAP09496 248 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 ACO1P21399 889 aaKnown RBP11.11□□□□□ -0.63
CD44-210ENST00000434472 GLRA2P23416 452 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 RRM1P23921 792 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 ATP5DP30049 168 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 MMP13P45452 471 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
CD44-210ENST00000434472 KRT17Q04695 432 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
CD44-210ENST00000434472 SURF1Q15526 300 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
CD44-210ENST00000434472 MON1BQ7L1V2 547 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 EXOC8Q8IYI6 725 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 ABRAQ8N0Z2 381 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 ATL2Q8NHH9 583 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 ASAP3Q8TDY4 903 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 P3H4Q92791 437 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 SNF8Q96H20 258 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 XPO6Q96QU8 1125 aaKnown RBP11.11□□□□□ -0.63
CD44-210ENST00000434472 MSTO1Q9BUK6 570 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 DCLK3Q9C098 648 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 AZI2Q9H6S1 392 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 ACTR5Q9H9F9 607 aaPredicted RBP11.11□□□□□ -0.63
CD44-210ENST00000434472 ADAM22Q9P0K1 906 aa11.11□□□□□ -0.63
CD44-210ENST00000434472 A0A0B4J269 797 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 RASGRF2O14827 1237 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 VNN1O95497 513 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 SHBGP04278 402 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 TMOD1P28289 359 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 GNA15P30679 374 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 EFNA5P52803 228 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 NOMO3P69849 1222 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 LMNB2Q03252 620 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 NEDD9Q14511 834 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 PLCB4Q15147 1175 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 ERMARDQ5T6L9 678 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 MFSD5Q6N075 450 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 C6orf89Q6UWU4 347 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 CRELD2Q6UXH1 353 aaPredicted RBP11.1□□□□□ -0.63
CD44-210ENST00000434472 ZPBP2Q6X784 338 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 CCDC121Q6ZUS5 278 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 CPNE8Q86YQ8 564 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 KATNAL2Q8IYT4 538 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 CACNA2D3Q8IZS8 1091 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
CD44-210ENST00000434472 CPA5Q8WXQ8 436 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 TMEM143Q96AN5 459 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 KLRG1Q96E93 195 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
CD44-210ENST00000434472 FAM167AQ96KS9 214 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 FOXP3Q9BZS1 431 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 IMPG2Q9BZV3 1241 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 SEMA4AQ9H3S1 761 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 ASIC3Q9UHC3 531 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 PTPN22Q9Y2R2 807 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 AFG3L2Q9Y4W6 797 aa11.1□□□□□ -0.63
CD44-210ENST00000434472 COL11A1P12107 1806 aaPredicted RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 TLDC2A0PJX2 215 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 NDC80O14777 642 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 GAS2O43903 313 aaKnown RBP11.09□□□□□ -0.63
CD44-210ENST00000434472 ADCY3O60266 1144 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 SORBS3O60504 671 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 ATF2P15336 505 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 ATP4AP20648 1035 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 KCNJ1P48048 391 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 ACOT2P49753 483 aa11.09□□□□□ -0.63
CD44-210ENST00000434472 LIG3P49916 1009 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms