RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 GOLGA6CA6NDK9 693 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 NFIBO00712 420 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 CHMP2AO43633 222 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 NCK2O43639 380 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 FTCDO95954 541 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 GOLGA6DP0CG33 693 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 CAPN2P17655 700 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 GARTP22102 1010 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 YWHABP31946 246 aaKnown RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 CXCR5P32302 372 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 LMAN1P49257 510 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 MXI1P50539 228 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 GPC3P51654 580 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 SMTNP53814 917 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 GALCP54803 685 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 GDF10P55107 478 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 PCBP4P57723 403 aaKnown RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 ITGB3BPQ13352 177 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 RSPO4Q2I0M5 234 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 CBWD6Q4V339 395 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 ZC2HC1CQ53FD0 456 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 OXLD1Q5BKU9 147 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 CBWD3Q5JTY5 395 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 CBWD5Q5RIA9 395 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 NOL9Q5SY16 702 aaKnown RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 CFAP58Q5T655 872 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 PPP1R2P3Q6NXS1 205 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 HAUS6Q7Z4H7 955 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 NLRX1Q86UT6 975 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 FAM71AQ8IYT1 594 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 METTL13Q8N6R0 699 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 ANKRD13CQ8N6S4 541 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 MCPH1Q8NEM0 835 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 LNX1Q8TBB1 728 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 JDP2Q8WYK2 163 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 ATP6V0A1Q93050 837 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 RUFY1Q96T51 708 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 FAM107BQ9H098 131 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 TAOK3Q9H2K8 898 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 FAM204AQ9H8W3 233 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 FAM114A2Q9NRY5 505 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 GOLGA6AQ9NYA3 693 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 AJAP1Q9UKB5 411 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 ZHX1Q9UKY1 873 aaPredicted RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 HCN2Q9UL51 889 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 PHIPQ8WWQ0 1821 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 ATXN2Q99700 1313 aaKnown RBP8.01□□□□□ -1.13
COL17A1-204ENST00000433822 SFI1A8K8P3 1242 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 HMGB1P1B2RPK0 211 aaPredicted RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 VWA5AO00534 786 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 KCNK3O14649 394 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 RTN2O75298 545 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 PPFIA4O75335 1185 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 PIGRP01833 764 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 GLI1P08151 1106 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 FAM157BP0CG42 384 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 VCAM1P19320 739 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 ERCC3P19447 782 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 TNFAIP3P21580 790 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 ALAS2P22557 587 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 CCND2P30279 289 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 ICAM3P32942 547 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 NOP2P46087 812 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 MFAP3P55082 362 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 HNRNPH2P55795 449 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 PTENP60484 403 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 RPS6P62753 249 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 CLDN10P78369 228 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 POU5F1Q01860 360 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 MAP2K1Q02750 393 aaPredicted RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 ARID5AQ03989 594 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 DHX34Q14147 1143 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 PLS1Q14651 629 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 DEFB115Q30KQ5 88 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 BRDTQ58F21 947 aaPredicted RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 PRRT3Q5FWE3 981 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 PHLDB3Q6NSJ2 640 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 RNF207Q6ZRF8 634 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 CROCCP2Q86T23 111 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 VSIG10LQ86VR7 867 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 ZNF677Q86XU0 584 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 APOBEC3FQ8IUX4 373 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 SCYL3Q8IZE3 742 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 TMEM161BQ8NDZ6 487 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 REPS2Q8NFH8 660 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 U2AF1L4Q8WU68 220 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 HDAC7Q8WUI4 952 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 SHC3Q92529 594 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 MFSD14AQ96MC6 490 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 CCDC43Q96MW1 224 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 AGPAT1Q99943 283 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 MOV10L1Q9BXT6 1211 aaKnown RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 RAB17Q9H0T7 212 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 EPB41L5Q9HCM4 733 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 TMEM8AQ9HCN3 771 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 PDLIM7Q9NR12 457 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 ZNF277Q9NRM2 450 aaPredicted RBP8□□□□□ -1.13
COL17A1-204ENST00000433822 HSPBP1Q9NZL4 362 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 UVRAGQ9P2Y5 699 aa8□□□□□ -1.13
COL17A1-204ENST00000433822 NOC2LQ9Y3T9 749 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms