RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 MRPS5P82675 430 aaKnown RBP20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 DSG1Q02413 1049 aa20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 POSTNQ15063 836 aa20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 PRSS55Q6UWB4 352 aaPredicted RBP20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 BRSK2Q8IWQ3 736 aa20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 MSLNLQ96KJ4 702 aa20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 KLHL5Q96PQ7 755 aa20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 CDCA3Q99618 268 aaPredicted RBP20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 AGPAT3Q9NRZ7 376 aa20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 HCFC2Q9Y5Z7 792 aa20.56■□□□□ 0.88
RPUSD3-207ENST00000433555 B3GAT3O94766 335 aa20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 NDUFV1P49821 464 aa20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 LEXMQ3ZCV2 418 aa20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 FAM171A1Q5VUB5 890 aa20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 DCLRE1AQ6PJP8 1040 aa20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 FEZF2Q8TBJ5 459 aa20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 ERCC4Q92889 916 aaPredicted RBP20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 MRPL17Q9NRX2 175 aaKnown RBP20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 UBQLN1Q9UMX0 589 aaKnown RBP20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 DENND4AQ7Z401 1863 aa20.55■□□□□ 0.88
RPUSD3-207ENST00000433555 CLIC2O15247 247 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 NCK2O43639 380 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 EXTL3O43909 919 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 RHOBTB3O94955 611 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 EPCAMP16422 314 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 RPL17P18621 184 aaKnown RBP20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 TKTP29401 623 aaKnown RBP20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 LRPAP1P30533 357 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 CBWD2Q8IUF1 395 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 NOC3LQ8WTT2 800 aaKnown RBP20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 SLC22A17Q8WUG5 538 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 RIN2Q8WYP3 895 aaPredicted RBP20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 HSPBP1Q9NZL4 362 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 STK39Q9UEW8 545 aa20.54■□□□□ 0.88
RPUSD3-207ENST00000433555 TEX28O15482 410 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 TMEM132DQ14C87 1099 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 USP41Q3LFD5 358 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 TJAP1Q5JTD0 557 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 SPATA1Q5VX52 437 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 CD302Q8IX05 232 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 GPD1LQ8N335 351 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 DDX27Q96GQ7 796 aaKnown RBP20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 RXFP1Q9HBX9 757 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 RBAKQ9NYW8 714 aaPredicted RBP20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 PTPRJQ12913 1337 aa20.53■□□□□ 0.88
RPUSD3-207ENST00000433555 GRXCR2A6NFK2 248 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 BMP1P13497 986 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 IL9P15248 144 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 CYP3A5P20815 502 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 FGFR3P22607 806 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 RPL9P32969 192 aaKnown RBP20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 CYP2J2P51589 502 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 PSMD2Q13200 908 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 BMS1Q14692 1282 aaKnown RBP20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 KNOP1Q1ED39 458 aaKnown RBP20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 SCARA3Q6AZY7 606 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 TMEM184AQ6ZMB5 413 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 CEP57Q86XR8 500 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 SMYD4Q8IYR2 804 aaPredicted RBP20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 NECAB3Q96P71 396 aaPredicted RBP20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 TTPALQ9BTX7 342 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 KCTD10Q9H3F6 313 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 ASB7Q9H672 318 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 CDH22Q9UJ99 828 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 DERAQ9Y315 318 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 VCANP13611 3396 aa20.52■□□□□ 0.88
RPUSD3-207ENST00000433555 ADAM12O43184 909 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 CLCN4P51793 760 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 POU5F1Q01860 360 aaKnown RBP20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 KCNB1Q14721 858 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 KIAA1841Q6NSI8 718 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 ANKRD54Q6NXT1 300 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 SYCE2Q6PIF2 218 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 GLYCTKQ8IVS8 523 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 LNX1Q8TBB1 728 aaPredicted RBP20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 PIK3R5Q8WYR1 880 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 FBXL18Q96ME1 805 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 TIGD1Q96MW7 591 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 IPO9Q96P70 1041 aaKnown RBP20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 APOL5Q9BWW9 433 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 PDE11AQ9HCR9 933 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 CD207Q9UJ71 328 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 C2CD2Q9Y426 696 aa20.51■□□□□ 0.87
RPUSD3-207ENST00000433555 SPTLC1O15269 473 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 MBTPS2O43462 519 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 IL18RAPO95256 599 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 LDHAP00338 332 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 MCM4P33991 863 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 ELAVL2Q12926 359 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 PSMD5Q16401 504 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 AAK1Q2M2I8 961 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 C9orf57Q5W0N0 161 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 LMBRD2Q68DH5 695 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 PTCRAQ6ISU1 281 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 KANK3Q6NY19 840 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 RSPO2Q6UXX9 243 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 C12orf56Q8IXR9 622 aa20.5■□□□□ 0.87
RPUSD3-207ENST00000433555 SMRP1Q8NCR6 262 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms