RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 TRIM10Q9UDY6 481 aa11.38□□□□□ -0.59
NEFM-202ENST00000433454 GUCA1BQ9UMX6 200 aa11.38□□□□□ -0.59
NEFM-202ENST00000433454 RCCD1A6NED2 376 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 MEFVO15553 781 aaPredicted RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 YARSP54577 528 aaKnown RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 CUL2Q13617 745 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 TMEM132DQ14C87 1099 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 SGSM1Q2NKQ1 1148 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 FAM228AQ86W67 206 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 NT5DC4Q86YG4 428 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 ARID3AQ99856 593 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 IRX2Q9BZI1 471 aaPredicted RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 PLEKHA5Q9HAU0 1116 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 APOBEC3GQ9HC16 384 aaKnown RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 NAGPAQ9UK23 515 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 TFR2Q9UP52 801 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 R3HCC1Q9Y3T6 440 aaKnown RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 C2CD2Q9Y426 696 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 ABL1P00519 1130 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 THPOP40225 353 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 PTK7Q13308 1070 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 ZNF699Q32M78 642 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 GLYCTKQ8IVS8 523 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 WDR24Q96S15 920 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 SYT11Q9BT88 431 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 SNTG2Q9NY99 539 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 NOC2LQ9Y3T9 749 aaKnown RBP11.37□□□□□ -0.59
NEFM-202ENST00000433454 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
NEFM-202ENST00000433454 KBTBD13C9JR72 458 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 PJA2O43164 708 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 CYP26A1O43174 497 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 RPS6KA5O75582 802 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 CST3P01034 146 aaPredicted RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 CHRNA1P02708 482 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 KRT5P13647 590 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 PDE6CP51160 858 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 MYL6P60660 151 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 NAB2Q15742 525 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 ZNF569Q5MCW4 686 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 EPS8L1Q8TE68 723 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 SNX27Q96L92 541 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 NIF3L1Q9GZT8 377 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 NXF3Q9H4D5 531 aaKnown RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 TRMT13Q9NUP7 481 aaKnown RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 PTPN22Q9Y2R2 807 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 A0A1W2PQ45 241 aaPredicted RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 A0A1W2PQY0 241 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.59
NEFM-202ENST00000433454 KRT19P08727 400 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 HSPA6P17066 643 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 CASQ1P31415 396 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 MGAT3Q09327 533 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 TWF2Q6IBS0 349 aaKnown RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 C1orf127Q8N9H9 656 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 LNX1Q8TBB1 728 aaPredicted RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 TAF4BQ92750 862 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 SECISBP2LQ93073 1101 aaKnown RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 AGPAT1Q99943 283 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 STARD7Q9NQZ5 370 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 SEPT11Q9NVA2 429 aaKnown RBP11.36□□□□□ -0.59
NEFM-202ENST00000433454 DERAQ9Y315 318 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 ATP8B3O60423 1300 aa11.36□□□□□ -0.59
NEFM-202ENST00000433454 CEP350Q5VT06 3117 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 ITGB3P05106 788 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 TNFAIP3P21580 790 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 SLC30A5Q8TAD4 765 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 OLIG1Q8TAK6 271 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 U2AF1L4Q8WU68 220 aaKnown RBP11.35□□□□□ -0.59
NEFM-202ENST00000433454 SLC20A1Q8WUM9 679 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 XYLT2Q9H1B5 865 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 SIX4Q9UIU6 781 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 NOCTQ9UK39 431 aaKnown RBP11.35□□□□□ -0.59
NEFM-202ENST00000433454 ITGA11Q9UKX5 1188 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 NENFQ9UMX5 172 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 ST3GAL5Q9UNP4 418 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 HES2Q9Y543 173 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 DUSP10Q9Y6W6 482 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 UMODL1Q5DID0 1318 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 A0A0U1RQG5 324 aaPredicted RBP11.35□□□□□ -0.59
NEFM-202ENST00000433454 FANCGO15287 622 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 RECQL4O94761 1208 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 SGPL1O95470 568 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 CYP11B1P15538 503 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 UBXN11Q5T124 520 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
NEFM-202ENST00000433454 UNC93B1Q9H1C4 597 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 PHF24Q9UPV7 400 aa11.35□□□□□ -0.59
NEFM-202ENST00000433454 GPR182O15218 404 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 CAND2O75155 1236 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 ACO1P21399 889 aaKnown RBP11.34□□□□□ -0.59
NEFM-202ENST00000433454 ATICP31939 592 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 BPIFB4P59827 614 aa11.34□□□□□ -0.59
NEFM-202ENST00000433454 NFX1Q12986 1120 aaKnown RBP11.34□□□□□ -0.59
NEFM-202ENST00000433454 SCARA3Q6AZY7 606 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms