RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-205	ENST00000433369	ZSWIM2	Q8NEG5	633 aa		13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	HPS3	Q969F9	1004 aa		13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	DDX27	Q96GQ7	796 aa	Known RBP	13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	RIPOR3	Q96MK2	946 aa		13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	UROC1	Q96N76	676 aa		13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	NECTIN4	Q96NY8	510 aa		13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	PCDHA7	Q9UN72	937 aa		13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	ZDBF2	Q9HCK1	2354 aa		13.79	□□□□□ -0.2
PTPN12-205	ENST00000433369	PPEF2	O14830	753 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	CUTA	O60888	179 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	N4BP1	O75113	896 aa	Known RBP	13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	ADRB2	P07550	413 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	IDE	P14735	1019 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	ADSS	P30520	456 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	ACOT2	P49753	483 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	ELAVL2	Q12926	359 aa	Known RBP	13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	KREMEN2	Q8NCW0	462 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	CMAS	Q8NFW8	434 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	DHX58	Q96C10	678 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	KIF12	Q96FN5	646 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	MSTO1	Q9BUK6	570 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	SMOC2	Q9H3U7	446 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	MRPL44	Q9H9J2	332 aa	Known RBP	13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	SLC38A7	Q9NVC3	462 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	MTRR	Q9UBK8	725 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	FBXW11	Q9UKB1	542 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	CPSF3	Q9UKF6	684 aa	Known RBP	13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	STYXL1	Q9Y6J8	313 aa		13.78	□□□□□ -0.2
PTPN12-205	ENST00000433369	PAPLN	O95428	1278 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	ASGR2	P07307	311 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	CASP1	P29466	404 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	OR1D2	P34982	312 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	WNT7B	P56706	349 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	ZXDA	P98168	799 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	C15orf39	Q6ZRI6	1047 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	FAM212A	Q96EL1	285 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	RPF1	Q9H9Y2	349 aa	Known RBP	13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	PLEKHA5	Q9HAU0	1116 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	PANK4	Q9NVE7	773 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	KBTBD4	Q9NVX7	518 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	SEL1L	Q9UBV2	794 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	CDY1	Q9Y6F8	540 aa		13.77	□□□□□ -0.21
PTPN12-205	ENST00000433369	TSC2	P49815	1807 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	TBC1D4	O60343	1298 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	PRPF6	O94906	941 aa	Known RBP	13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	GCNT3	O95395	438 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	NFIC	P08651	508 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	GAP43	P17677	238 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	SCP2	P22307	547 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	LRPAP1	P30533	357 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	RPL9	P32969	192 aa	Known RBP	13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	PPP2R3A	Q06190	1150 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	RAB33A	Q14088	237 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	VARS2	Q5ST30	1063 aa	Known RBP	13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	L1TD1	Q5T7N2	865 aa	Known RBP	13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	ADAL	Q6DHV7	355 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	JADE1	Q6IE81	842 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	HFE2	Q6ZVN8	426 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	SMG7	Q92540	1137 aa	Known RBP	13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	EDA	Q92838	391 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	SUSD3	Q96L08	255 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	TRIM9	Q9C026	710 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	PLEKHA4	Q9H4M7	779 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	OLFML3	Q9NRN5	406 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	LIMD1	Q9UGP4	676 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	RCOR1	Q9UKL0	485 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	AGO2	Q9UKV8	859 aa	Known RBP	13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	NR2E1	Q9Y466	385 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	WDFY4	Q6ZS81	3184 aa		13.76	□□□□□ -0.21
PTPN12-205	ENST00000433369	PRR33	A8MZF0	331 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	POLR2D	O15514	142 aa	Known RBP	13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	ZMYND10	O75800	440 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	C1R	P00736	705 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	MCM4	P33991	863 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	HOXD13	P35453	343 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	ME1	P48163	572 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	NTHL1	P78549	312 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	CREM	Q03060	361 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	MRPL58	Q14197	206 aa	Known RBP	13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	PTPN21	Q16825	1174 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	RESP18	Q5W5W9	173 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	SCARA3	Q6AZY7	606 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	CCDC149	Q6ZUS6	474 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	GRAMD1C	Q8IYS0	662 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	TDRD5	Q8NAT2	981 aa	Known RBP	13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	KCNG4	Q8TDN1	519 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	HDAC7	Q8WUI4	952 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	POMGNT1	Q8WZA1	660 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	HVCN1	Q96D96	273 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	FAM84A	Q96KN4	292 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	MYADM	Q96S97	322 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	PRKD2	Q9BZL6	878 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	TNMD	Q9H2S6	317 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	WDR6	Q9NNW5	1121 aa	Known RBP	13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	NUB1	Q9Y5A7	615 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	BACE2	Q9Y5Z0	518 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	MUC6	Q6W4X9	2439 aa		13.75	□□□□□ -0.21
PTPN12-205	ENST00000433369	CLUH	O75153	1309 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms