RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ELNP15502 786 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 TAF3Q5VWG9 929 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 CRELD2Q6UXH1 353 aaPredicted RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 ZBTB8OSQ8IWT0 167 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 IFT81Q8WYA0 676 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 GLG1Q92896 1179 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 GPR20Q99678 358 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 C2orf40Q9H1Z8 148 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 RBAKQ9NYW8 714 aaPredicted RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 COG5Q9UP83 839 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 CLDN3O15551 220 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 ASAP2O43150 1006 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 SYF2O95926 243 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 HLA-DRAP01903 254 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 MYBL1P10243 752 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 KRT5P13647 590 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 TBXAS1P24557 533 aaPredicted RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 PIK3CAP42336 1068 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 NLRP11P59045 1033 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 BIRC3Q13489 604 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 CAPSQ13938 189 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 GSPT2Q8IYD1 628 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 MREGQ8N565 214 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 ATP8B4Q8TF62 1192 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 DDX1Q92499 740 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 CGRRF1Q99675 332 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 MRPL4Q9BYD3 311 aaKnown RBP13.75□□□□□ -0.21
DDX56-204ENST00000431640 SMARCAD1Q9H4L7 1026 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 VTA1Q9NP79 307 aa13.75□□□□□ -0.21
DDX56-204ENST00000431640 SIP14410 1827 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 CCDC66A2RUB6 948 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 GOLGA8KD6RF30 607 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 TOM1L1O75674 476 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 FGGP02679 453 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 CYBAP13498 195 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 SMPD1P17405 629 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 GGCXP38435 758 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 CARSP49589 748 aaKnown RBP13.74□□□□□ -0.21
DDX56-204ENST00000431640 ACOT2P49753 483 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 ACVR2BQ13705 512 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 TFDP1Q14186 410 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 TTLL4Q14679 1199 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 CLEC16AQ2KHT3 1053 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 TRIM72Q6ZMU5 477 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 CASKIN2Q8WXE0 1202 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 RNPC3Q96LT9 517 aaKnown RBP13.74□□□□□ -0.21
DDX56-204ENST00000431640 HINFPQ9BQA5 517 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 ZHX1Q9UKY1 873 aaPredicted RBP13.74□□□□□ -0.21
DDX56-204ENST00000431640 NFU1Q9UMS0 254 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 FAN1Q9Y2M0 1017 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 FRMPD3Q5JV73 1810 aa13.74□□□□□ -0.21
DDX56-204ENST00000431640 IGKV6-21A0A0C4DH24 114 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 HBP1O60381 514 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 PHACTR2O75167 634 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 CTNNA2P26232 953 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 MRPS25P82663 173 aaKnown RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 ARHGAP1Q07960 439 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 IRF5Q13568 498 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 MAPK6Q16659 721 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 HSDL1Q3SXM5 330 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 TDRD10Q5VZ19 366 aaKnown RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 CDCA2Q69YH5 1023 aaPredicted RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 ZNF564Q8TBZ8 553 aaPredicted RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 ZNF653Q96CK0 615 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 ZBTB45Q96K62 511 aaPredicted RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 GDAP1L1Q96MZ0 367 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 RUNDC3BQ96NL0 473 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 ZSWIM1Q9BR11 485 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 NUP85Q9BW27 656 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 PLVAPQ9BX97 442 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 RAB17Q9H0T7 212 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 AVENQ9NQS1 362 aaPredicted RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.212e-10■■■■■ 195.6
DDX56-204ENST00000431640 FAM114A2Q9NRY5 505 aa13.73□□□□□ -0.21
DDX56-204ENST00000431640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX56-204ENST00000431640 UTP11Q9Y3A2 253 aaKnown RBP13.73□□□□□ -0.21
DDX56-204ENST00000431640 FAM187AA6NFU0 413 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 RNF40O75150 1001 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 TXNP10599 105 aaKnown RBP13.72□□□□□ -0.21
DDX56-204ENST00000431640 HSPA8P11142 646 aaKnown RBP13.72□□□□□ -0.21
DDX56-204ENST00000431640 PTENP60484 403 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 LAMTOR4Q0VGL1 99 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 PPFIA1Q13136 1202 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 CUL2Q13617 745 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 DHX34Q14147 1143 aaKnown RBP13.72□□□□□ -0.21
DDX56-204ENST00000431640 MESDQ14696 234 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
DDX56-204ENST00000431640 PTPROQ16827 1216 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms