RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 HERC2P3Q9BVR0 1158 aa21.76■■□□□ 1.07
CSNK1E-207ENST00000430335 ZBP1Q9H171 429 aa21.76■■□□□ 1.07
CSNK1E-207ENST00000430335 NSUN3Q9H649 340 aaKnown RBP21.76■■□□□ 1.07
CSNK1E-207ENST00000430335 PDE11AQ9HCR9 933 aa21.76■■□□□ 1.07
CSNK1E-207ENST00000430335 PRRC2BQ5JSZ5 2229 aaKnown RBP21.76■■□□□ 1.07
CSNK1E-207ENST00000430335 SF3B1O75533 1304 aaKnown RBP eCLIP21.76■■□□□ 1.07
CSNK1E-207ENST00000430335 PLXNA4Q9HCM2 1894 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 PPP1R3GB7ZBB8 358 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 PSMA7O14818 248 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 CTSAP10619 480 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 CD44P16070 742 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 NR2F2P24468 414 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 CYP24A1Q07973 514 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 ELAVL2Q12926 359 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 PSMD6Q15008 389 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 CD300LGQ6UXG3 332 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 TMC7Q7Z402 723 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 ENTPD7Q9NQZ7 604 aa21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 PDCD11Q14690 1871 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-207ENST00000430335 MAPK13O15264 365 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 CCNE1P24864 410 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 LRRC63Q05C16 580 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 FOXR2Q6PJQ5 311 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 GPR65Q8IYL9 337 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 C3orf58Q8NDZ4 430 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 MICAL1Q8TDZ2 1067 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 CACTINQ8WUQ7 758 aaKnown RBP21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 TSG101Q99816 390 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 GPR62Q9BZJ7 368 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 FRMD4BQ9Y2L6 1034 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 IRAK3Q9Y616 596 aa21.74■■□□□ 1.07
CSNK1E-207ENST00000430335 ANO9A1A5B4 782 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 CASP4P49662 377 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 GUCY2FP51841 1108 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 ADAM9Q13443 819 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 SMC1AQ14683 1233 aaKnown RBP21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 USP41Q3LFD5 358 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 PLPP4Q5VZY2 271 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 C9orf57Q5W0N0 161 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 RBM43Q6ZSC3 357 aaKnown RBP21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 WDR49Q8IV35 697 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 ZC3H3Q8IXZ2 948 aaKnown RBP21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 HASPINQ8TF76 798 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 PPP2R3CQ969Q6 453 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 CHST7Q9NS84 486 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 DPP3Q9NY33 737 aa21.73■■□□□ 1.07
CSNK1E-207ENST00000430335 MYO7AQ13402 2215 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 TRAPPC3O43617 180 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 PAX3P23760 479 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 PMS1P54277 932 aaKnown RBP21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 TFAMQ00059 246 aaKnown RBP21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 DSG1Q02413 1049 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 TCEAL5Q5H9L2 206 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 CEP135Q66GS9 1140 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 ANKRD40Q6AI12 368 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 TAS1R1Q7RTX1 841 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 MICALL1Q8N3F8 863 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 MRPL43Q8N983 215 aaKnown RBP21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 MAFAQ8NHW3 353 aaPredicted RBP21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 FNBP1Q96RU3 617 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 CGRRF1Q99675 332 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 INTS13Q9NVM9 706 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 SSX2IPQ9Y2D8 614 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 ANK1P16157 1881 aa21.72■■□□□ 1.07
CSNK1E-207ENST00000430335 C2orf71A6NGG8 1288 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 PIRO00625 290 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 CETN3O15182 167 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 LILRB3O75022 631 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 AKAP3O75969 853 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 CSPG5O95196 566 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 CXCL14O95715 111 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 URODP06132 367 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 TMEM191BP0C7N4 346 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 PTMSP20962 102 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 IGFBP6P24592 240 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 FKBP3Q00688 224 aaKnown RBP21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 ENPEPQ07075 957 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 PTPN14Q15678 1187 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 DUOXA2Q1HG44 320 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 TMEM130Q8N3G9 435 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 MLKLQ8NB16 471 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 PARD3BQ8TEW8 1205 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 ANKRD36BP1Q96IX9 119 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 MKNK1Q9BUB5 465 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 GZF1Q9H116 711 aaPredicted RBP21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 ITGA11Q9UKX5 1188 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 NUB1Q9Y5A7 615 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 PCDHGC5Q9Y5F6 944 aa21.71■■□□□ 1.07
CSNK1E-207ENST00000430335 BICDL2A1A5D9 508 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 HIDE1A8MVS5 230 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 DLATP10515 647 aaKnown RBP21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 PSMC2P35998 433 aaKnown RBP21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 GLUD2P49448 558 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 AARSP49588 968 aaKnown RBP eCLIP21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 CLDN10P78369 228 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 CCDC183Q5T5S1 534 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 FAM171A1Q5VUB5 890 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 KIAA0319Q5VV43 1072 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 KLHL10Q6JEL2 608 aa21.7■■□□□ 1.06
CSNK1E-207ENST00000430335 TTI2Q6NXR4 508 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms