RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 C11orf63Q6NUN7 778 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 TRIM72Q6ZMU5 477 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 RBBP8NLQ8NC74 664 aaPredicted RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 ENO4A6NNW6 628 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 TTC4O95801 387 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 GYS1P13807 737 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 DLG4P78352 724 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 SPP2Q13103 211 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 ERMARDQ5T6L9 678 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 TRIM42Q8IWZ5 723 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 HES6Q96HZ4 224 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 FAM161BQ96MY7 647 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 G3BP2Q9UN86 482 aaKnown RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 SMG5Q9UPR3 1016 aaKnown RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 ASAP2O43150 1006 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 SLC8A3P57103 927 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 NXNQ6DKJ4 435 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 HEXIM2Q96MH2 286 aaKnown RBP13.37□□□□□ -0.27
CPNE4-201ENST00000429747 SENP1Q9P0U3 644 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 CTNNAL1Q9UBT7 734 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 HAO1Q9UJM8 370 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 GRIN2DO15399 1336 aa13.37□□□□□ -0.27
CPNE4-201ENST00000429747 SPEF2Q9C093 1822 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 M0R2N6 131 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 KIF1CO43896 1103 aaKnown RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 DRD4P21917 467 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 TBXAS1P24557 533 aaPredicted RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 CHRNA5P30532 468 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 SNX16P57768 344 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 OVGP1Q12889 678 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 RBBP5Q15291 538 aaKnown RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 ZNF699Q32M78 642 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 LVRNQ6Q4G3 990 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 NME8Q8N427 588 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 KCTD17Q8N5Z5 321 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 TTC1Q99614 292 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 TBX20Q9UMR3 447 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 A6NJR5 290 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 GSTA1P08263 222 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 NOP14P78316 857 aaKnown RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 ASTE1Q2TB18 679 aaPredicted RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 FAM160B1Q5W0V3 765 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 TTC13Q8NBP0 860 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 RAB3IL1Q8TBN0 382 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 CDKL2Q92772 493 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 CNOT7Q9UIV1 285 aaKnown RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 NR2E1Q9Y466 385 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 BTNL10A8MVZ5 291 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 CLGNO14967 610 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 MED7O43513 233 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 GHRP10912 638 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 ARL1P40616 181 aaPredicted RBP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 SMTNL2Q2TAL5 461 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 DCAF15Q66K64 600 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 DUPD1Q68J44 220 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 AGGF1Q8N302 714 aaeCLIP13.36□□□□□ -0.27
CPNE4-201ENST00000429747 FAM149B1Q96BN6 582 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 SENP7Q9BQF6 1050 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 DNAJC18Q9H819 358 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 ERVK-5Q9HDB9 667 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 WHRNQ9P202 907 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 NAALADL1Q9UQQ1 740 aa13.36□□□□□ -0.27
CPNE4-201ENST00000429747 F5H423 210 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 TGFB1I1O43294 461 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 CALCAP01258 141 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 BAATQ14032 418 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 ZNF667Q5HYK9 610 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 PCGF5Q86SE9 256 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 SMYD3Q9H7B4 428 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 CHST7Q9NS84 486 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 COMMD10Q9Y6G5 202 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 ENTPD3O75355 529 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 SKAP2O75563 359 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 SHROOM1Q2M3G4 852 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-201ENST00000429747 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 C1orf186Q6ZWK4 172 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 SV2AQ7L0J3 742 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 CRLF3Q8IUI8 442 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 RCOR2Q8IZ40 523 aa13.35□□□□□ -0.27
CPNE4-201ENST00000429747 RNF34Q969K3 372 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms