RNA–Protein interactions for RNA: ENST00000428858.1

TTC28-AS1-209, TTC28 antisense RNA 1, humanhuman

TSL 4

Gene TTC28-AS1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-209ENST00000428858 TUBGCP4Q9UGJ1 667 aa8.84□□□□□ -0.99
TTC28-AS1-209ENST00000428858 NFE2L3Q9Y4A8 694 aa8.84□□□□□ -0.99
TTC28-AS1-209ENST00000428858 TET1Q8NFU7 2136 aa8.84□□□□□ -0.99
TTC28-AS1-209ENST00000428858 PTPRJQ12913 1337 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 LRRIQ3A6PVS8 624 aaPredicted RBP8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 SOX1O00570 391 aaPredicted RBP8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 NRP1O14786 923 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 STX10O60499 249 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 ZC3H11AO75152 810 aaKnown RBP eCLIP8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 EFEMP2O95967 443 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 ALDH2P05091 517 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 PAX3P23760 479 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 GTF2H1P32780 548 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 ALDH7A1P49419 539 aaKnown RBP8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 ZNF165P49910 485 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 TERF1P54274 439 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 DLG4P78352 724 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 TFAMQ00059 246 aaKnown RBP8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 SPAG1Q07617 926 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 NCAPHQ15003 741 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 UPP1Q16831 310 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 DUOXA2Q1HG44 320 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 CDKAL1Q5VV42 579 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 C15orf39Q6ZRI6 1047 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 TRIM59Q8IWR1 403 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 C1orf127Q8N9H9 656 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 OR5B17Q8NGF7 314 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 CACTINQ8WUQ7 758 aaKnown RBP8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 SLC35C1Q96A29 364 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 MTMR12Q9C0I1 747 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 INTS13Q9NVM9 706 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 MARCH5Q9NX47 278 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 DPP3Q9NY33 737 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 STK39Q9UEW8 545 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 ARMCX3Q9UH62 379 aaPredicted RBP8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 ITGA11Q9UKX5 1188 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 PCDHB12Q9Y5F1 795 aa8.83□□□□□ -1
TTC28-AS1-209ENST00000428858 TTC3P53804 2025 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 MICAL3Q7RTP6 2002 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 ANO9A1A5B4 782 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 CASTOR2A6NHX0 329 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 PODXLO00592 558 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 PIRO00625 290 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 PMM2O15305 246 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 B3GAT3O94766 335 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 KIF4AO95239 1232 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 TNNC2P02585 160 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 C4BPAP04003 597 aaKnown RBP8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 TMEM191BP0C7N4 346 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 DLATP10515 647 aaKnown RBP8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 TNNI1P19237 187 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 CTNNB1P35222 781 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 PBX3P40426 434 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 OR1G1P47890 313 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 CLCNKBP51801 687 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 PLCB3Q01970 1234 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 ZACNQ401N2 412 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 CCDC40Q4G0X9 1142 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 EPC2Q52LR7 807 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 C9orf57Q5W0N0 161 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 DCLRE1AQ6PJP8 1040 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 LRSAM1Q6UWE0 723 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 CD300LGQ6UXG3 332 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 TMEM173Q86WV6 379 aaPredicted RBP8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 FAM114A1Q8IWE2 563 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 RNF168Q8IYW5 571 aaPredicted RBP8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 LRRC52Q8N7C0 313 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 BCL7CQ8WUZ0 217 aaPredicted RBP8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 ZNF516Q92618 1163 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 IGSF21Q96ID5 467 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 ANKRD36BP1Q96IX9 119 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 POP1Q99575 1024 aaKnown RBP8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 PAAF1Q9BRP4 392 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 C17orf80Q9BSJ5 609 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 C11orf84Q9BUA3 381 aaPredicted RBP8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 COLEC11Q9BWP8 271 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 HSD3B7Q9H2F3 369 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 GOLGA2P5Q9HBQ8 144 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 TMEM8AQ9HCN3 771 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 FANCLQ9NW38 375 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 SPG21Q9NZD8 308 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 SIX4Q9UIU6 781 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 LZTS1Q9Y250 596 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 FAN1Q9Y2M0 1017 aa8.82□□□□□ -1
TTC28-AS1-209ENST00000428858 H3BNC9 293 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 FGF18O76093 207 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 STAU1O95793 577 aaKnown RBP8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 TRIM49P0CI25 452 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 TRIM49CP0CI26 452 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 ZNF18P17022 549 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 EEF1GP26641 437 aaKnown RBP8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 PNPLA4P41247 253 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 AARSP49588 968 aaKnown RBP eCLIP8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 GUCY2FP51841 1108 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 RBP5P82980 135 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 UBE3AQ05086 875 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 PPP3CAQ08209 521 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 IQCB1Q15051 598 aa8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 TPD52L1Q16890 204 aaPredicted RBP8.81□□□□□ -1
TTC28-AS1-209ENST00000428858 DCAF17Q5H9S7 520 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms