RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 WNT16Q9UBV4 365 aa18.67■□□□□ 0.58
TRIM39-209ENST00000428728 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.67■□□□□ 0.58
TRIM39-209ENST00000428728 BACE2Q9Y5Z0 518 aa18.67■□□□□ 0.58
TRIM39-209ENST00000428728 CXCL8P10145 99 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 ARPP19P56211 112 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 PABPC1LQ4VXU2 614 aaKnown RBP18.66■□□□□ 0.58
TRIM39-209ENST00000428728 PARM1Q6UWI2 310 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 GPBP1Q86WP2 473 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 TMEM130Q8N3G9 435 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 RASSF8Q8NHQ8 419 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 LRRC15Q8TF66 581 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 FGF13Q92913 245 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 FGF14Q92915 247 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 CALML4Q96GE6 196 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 AK8Q96MA6 479 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 TBC1D32Q96NH3 1257 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 RTP3Q9BQQ7 232 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 REEP2Q9BRK0 252 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 RPP25Q9BUL9 199 aaKnown RBP18.66■□□□□ 0.58
TRIM39-209ENST00000428728 TBC1D17Q9HA65 648 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 KCND2Q9NZV8 630 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 LARSQ9P2J5 1176 aaKnown RBP18.66■□□□□ 0.58
TRIM39-209ENST00000428728 TUBGCP4Q9UGJ1 667 aa18.66■□□□□ 0.58
TRIM39-209ENST00000428728 ZFP37Q9Y6Q3 630 aaPredicted RBP18.66■□□□□ 0.58
TRIM39-209ENST00000428728 PATJQ8NI35 1801 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 WDR27A2RRH5 827 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 CLDN3O15551 220 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 MCM4P33991 863 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 UBA7P41226 1012 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 GRIN1Q05586 938 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 SPAG1Q07617 926 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 UVSSAQ2YD98 709 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 SLC10A6Q3KNW5 377 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 ARSHQ5FYA8 562 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 ZPBP2Q6X784 338 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 CCDC105Q8IYK2 499 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 KCTD17Q8N5Z5 321 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 HAPLN2Q9GZV7 340 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 ARHGEF3Q9NR81 526 aa18.65■□□□□ 0.58
TRIM39-209ENST00000428728 DNMT3BQ9UBC3 853 aaKnown RBP18.65■□□□□ 0.58
TRIM39-209ENST00000428728 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
TRIM39-209ENST00000428728 K7ENM7 598 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 PRRG1O14668 218 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 SYN3O14994 580 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 FAM13AO94988 1023 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 POU2F2P09086 479 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 PLCG1P19174 1290 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 RPL9P32969 192 aaKnown RBP18.64■□□□□ 0.57
TRIM39-209ENST00000428728 NCKAP1LP55160 1127 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 MCL1Q07820 350 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 SLC8B1Q6J4K2 584 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 MTSS1LQ765P7 747 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 DTWD2Q8NBA8 298 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 KXD1Q9BQD3 176 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 KCNG1Q9UIX4 513 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 ODF2LQ9ULJ1 636 aa18.64■□□□□ 0.57
TRIM39-209ENST00000428728 TICRRQ7Z2Z1 1910 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 H0YCG3 227 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 HNRNPDLO14979 420 aaKnown RBP18.63■□□□□ 0.57
TRIM39-209ENST00000428728 LRG1P02750 347 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 KRT18P05783 430 aaKnown RBP18.63■□□□□ 0.57
TRIM39-209ENST00000428728 ELF1P32519 619 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 TNFSF9P41273 254 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 LIG4P49917 911 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 MCM6Q14566 821 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 KARSQ15046 597 aaKnown RBP18.63■□□□□ 0.57
TRIM39-209ENST00000428728 CTXN3Q4LDR2 81 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 BRAPQ7Z569 592 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 NPAS3Q8IXF0 933 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 SUSD3Q96L08 255 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 ZHX3Q9H4I2 956 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 SLC2A4RGQ9NR83 387 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 BLOC1S4Q9NUP1 217 aa18.63■□□□□ 0.57
TRIM39-209ENST00000428728 SCN1AP35498 2009 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 FANCMQ8IYD8 2048 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 H7C4K7 107 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 SLC26A4O43511 780 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 BMP15O95972 392 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 RHOP08100 348 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 NBL1P41271 181 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 PPP2R3AQ06190 1150 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 ANGPT1Q15389 498 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 SF3A1Q15459 793 aaKnown RBP18.62■□□□□ 0.57
TRIM39-209ENST00000428728 SLC5A9Q2M3M2 681 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 SPECC1Q5M775 1068 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 ZNF280DQ6N043 979 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 FRMD5Q7Z6J6 570 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 MYCT1Q8N699 235 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 ZNF461Q8TAF7 563 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 KIF12Q96FN5 646 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 CYP4F11Q9HBI6 524 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 FBXL5Q9UKA1 691 aa18.62■□□□□ 0.57
TRIM39-209ENST00000428728 MRPS23Q9Y3D9 190 aaKnown RBP18.62■□□□□ 0.57
TRIM39-209ENST00000428728 ARHGEF37A1IGU5 675 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 ABLIM3O94929 683 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 DCNP07585 359 aaKnown RBP18.61■□□□□ 0.57
TRIM39-209ENST00000428728 CLTAP09496 248 aa18.61■□□□□ 0.57
TRIM39-209ENST00000428728 LONP1P36776 959 aaKnown RBP18.61■□□□□ 0.57
TRIM39-209ENST00000428728 GPC5P78333 572 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms